Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g3150 ATGCTTACATGCATAGCACGTCCCAAGAAATCAGGCACGGGCAGCAACAACGAGTCTCTGAATAAGACCGATGATTCCGATCCCAACAACAAAAACCAGTCCATGAAATCTCTCACTTCCCAGATAAAGGACATGGCGCTGAAGGCGTCGGGGGCGTACAAGCATTGCGCGCCGTGCACGGCGGGGCCGGCGGGGAGACTGGTGAGGAGAAACGGGGAGTCGTCGCCGGAGACGGACTCGGAGAGGTTCAGGTGGTCGTACCGGAGGACAGGGAGCTCGACGAGAGGTTGGGGGAAGGAGATGGAGGCGAGGCTGAAGGGGATATCGTCGTCGAGTGGGGAAGGCACGCCGAACTCCGCCAGCGGACGGCGGTTGGAGCCGGTGGTTCTGTTCGTCGAAGAGAATGAACCAAAGGAGTGGGTGGCGAACGTGGAGCCCGGCGTTTTGATCACCTTCGTGTCGCTTCCACGTGGCGGCAACGATCTCAAGCGCATTCGTTTCAGTCGCGAGATGTTTAACAAATTGCAAGCTCAAAGATGGTGGGCGGAGAACTATGACAGGGTGATGGAACTTTACAATGTTCAAAGGCTTAACCGTCAAGCATTCCCTCTTCCAACGCCGCCAAGGTCCGAAGATGAGAACTCAAAGCTTGAACCAGCAGAGGAGAGCCCAGTAACACCACCACTAAGTAGGGAAAGACTAACTCGCAATTTGCACCGTCCAACAGGTATGGGAGTGGGATACTCTTCCTCGGATTCCTTCGATCATCAATCGATGCAATCCCGGAAGCTGCATGAATTAAATGGTGTTAACTCAACTCCAAAAGTCTCAACCATTAGTGCTGCCAAGACTGAGATATCGTCAATGGATGCTTCAATCAGAAGTAGCTCATCCAGAGAGGCTGATCAATCCGGCGATCTATCAATCAGCAATGCAACCGATTTGGATACCGAATGGGTTGAGCAAGATGAACCTGGTGTTTATATTACCATCAGAGCATTGCCAGGTGGCAAAAAGGAGCTCAGACGAGTTAGGTTCAGCCGAGAAAAATTTGGGGAGATGCATGCTAGATTATGGTGGGAGGAGAATCGTGCTAGAATACATGAACAATACTTGTGA 1119 0.5201 MLTCIARPKKSGTGSNNESLNKTDDSDPNNKNQSMKSLTSQIKDMALKASGAYKHCAPCTAGPAGRLVRRNGESSPETDSERFRWSYRRTGSSTRGWGKEMEARLKGISSSSGEGTPNSASGRRLEPVVLFVEENEPKEWVANVEPGVLITFVSLPRGGNDLKRIRFSREMFNKLQAQRWWAENYDRVMELYNVQRLNRQAFPLPTPPRSEDENSKLEPAEESPVTPPLSRERLTRNLHRPTGMGVGYSSSDSFDHQSMQSRKLHELNGVNSTPKVSTISAAKTEISSMDASIRSSSSREADQSGDLSISNATDLDTEWVEQDEPGVYITIRALPGGKKELRRVRFSREKFGEMHARLWWEENRARIHEQYL* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g3150 372 MobiDBLite consensus disorder prediction 201 259 - -
Ahy11g3150 372 MobiDBLite consensus disorder prediction 9 43 - -
Ahy11g3150 372 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 372 IPR044532 -
Ahy11g3150 372 Pfam Transcription factor regulating root and shoot growth via Pin3 317 371 IPR013591 -
Ahy11g3150 372 Pfam Transcription factor regulating root and shoot growth via Pin3 138 192 IPR013591 -
Ahy11g3150 372 Pfam Transcription factor BRX N-terminal domain 28 59 IPR027988 -
Ahy11g3150 372 MobiDBLite consensus disorder prediction 61 82 - -
Ahy11g3150 372 MobiDBLite consensus disorder prediction 1 43 - -
Ahy11g3150 372 MobiDBLite consensus disorder prediction 244 259 - -
Ahy11g3150 372 ProSiteProfiles BRX domain profile. 317 372 IPR013591 -
Ahy11g3150 372 MobiDBLite consensus disorder prediction 287 310 - -
Ahy11g3150 372 ProSiteProfiles BRX domain profile. 138 193 IPR013591 -
Ahy11g3150 372 PANTHER PROTEIN BREVIS RADIX-LIKE 4 1 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g3150 Ahy-Chr11 149117581 149121910 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g3150 1 372 Major Intrinsic Protein MIP AT1G31880 43.590 4.18e-84 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g3150 - - aip:107620530 697.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g3150 11 149117581 149121910 Ahy11g3150 11 149117581 149121910 ECH
Ahy11g3150 11 149117581 149121910 Ahy1g1805 1 94306152 94310277 hybridization
Ahy11g3150 11 149117581 149121910 Ahy13g2301 13 47871527 47879085 PCT
Ahy11g3150 11 149117581 149121910 Ahy3g2016 3 45129558 45137465 PCT
Ahy13g2301 13 47871527 47879085 Ahy11g3150 11 149117581 149121910 PCT
Ahy3g2016 3 45129558 45137465 Ahy11g3150 11 149117581 149121910 PCT