Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g3137 ATGAGGAAAGGACTTCTGGGCCCCAGTCTCAAGCTCTCTGTCCCTGCTTCATCTGATCAAGCTTCTTTTTCCAAGTTCCTGACTGAAAGTGGAACCTTTAAAGATGGGGATCTGCTTGTCAACAGGGATGGAGTTAGAATTGTTTCTCAGAGTGAAGTGGAGCCTGAAATTCAAATGAATATCGAGGAGTCTATGCGAAAGCAGATAGCACAAGAGCTGAAAATTAATCAATCAGCACAATGTCCTTATGTTGTTGTCTGCTACCAGTCATTCTATGCCAATGGTGTTATATCAATCATCTTAGAGTACATGGATGGAGGGTCCTTAGCGGATCTTCTGAAGAAAGTCAAAACAATTCCAGAAGCTAATCTTGCAGCCATCTGTAAACAGGTGCTAAAGGGATTAATGTATCTTCACCATGAAAAACATATCATCCACAGAGACTTGAAACCTTCTAATTTGTTGATAAATCATAGAGGTGAAGTAAAGATTACTGATTTTGGTGTGAGTGCAATTATGGAAAGTACATCCGGTCAAGCAAATACTTTCATCGGCACATTCAACTATATGTCTCCAGAGAGGATCAACGGTAGCCAGCGTGGCTATAACTACAAAAGTGATATATGGAGCTTGGGATTAATATTGCTCGAGTGTGCTATGGGGAGGTTTCCATACACACCACCAGATCAAAGTGAGACATGGGAGAGTATTTTCGAACTTATTGAAACCATTGTAGATAAACCTCCTCCTACTGCTCCATCAGAACACTTTTCTGCAGAATTTTGCTCATTTATATCAGCATGCTTACAGAAAGACCCGAAGGATAGACTAACAGCTCAGGAACTTATGGGACATCCTTTTGTCAGCATGTACGATGACTTGCATATAGATCTTGGAGCATACTTCTCCAACGCAGGATCTCCACTCGCAACCTTATAA 939 0.4111 MRKGLLGPSLKLSVPASSDQASFSKFLTESGTFKDGDLLVNRDGVRIVSQSEVEPEIQMNIEESMRKQIAQELKINQSAQCPYVVVCYQSFYANGVISIILEYMDGGSLADLLKKVKTIPEANLAAICKQVLKGLMYLHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMESTSGQANTFIGTFNYMSPERINGSQRGYNYKSDIWSLGLILLECAMGRFPYTPPDQSETWESIFELIETIVDKPPPTAPSEHFSAEFCSFISACLQKDPKDRLTAQELMGHPFVSMYDDLHIDLGAYFSNAGSPLATL* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g3137 312 PANTHER MAP KINASE KINASE 1 55 - -
Ahy11g3137 312 CDD PKc_MAPKK_plant_like 56 292 - -
Ahy11g3137 312 SUPERFAMILY Protein kinase-like (PK-like) 60 294 IPR011009 -
Ahy11g3137 312 ProSitePatterns Serine/Threonine protein kinases active-site signature. 144 156 IPR008271 GO:0004672|GO:0006468
Ahy11g3137 312 ProSiteProfiles Protein kinase domain profile. 1 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy11g3137 312 SMART serkin_6 33 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy11g3137 312 Gene3D Phosphorylase Kinase; domain 1 54 105 - -
Ahy11g3137 312 Pfam Protein kinase domain 61 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy11g3137 312 Gene3D Transferase(Phosphotransferase) domain 1 106 307 - -
Ahy11g3137 312 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 56 312 - -
Ahy11g3137 312 PANTHER MAP KINASE KINASE 56 312 - -
Ahy11g3137 312 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 1 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g3137 Ahy-Chr11 149023242 149027087 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g3137 28 311 MAP Kinase Kinase Gene Family AT4G26070 57.831 1.81e-135 386
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Ahy11g3137 Pkinase 1.80E-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g3137 K20603 - gmx:100789734 539.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g3137 11 149023242 149027087 Ahy11g3137 11 149023242 149027087 ECH
Ahy11g3137 11 149023242 149027087 Ahy1g1815 1 94389412 94393272 hybridization
Ahy11g3137 11 149023242 149027087 Ahy13g2283 13 47114563 47118465 PCT
Ahy11g3137 11 149023242 149027087 Ahy3g2006 3 44320657 44324158 PCT
Ahy13g2283 13 47114563 47118465 Ahy11g3137 11 149023242 149027087 PCT
Ahy3g2006 3 44320657 44324158 Ahy11g3137 11 149023242 149027087 PCT