Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g3136 ATGGAGGAAATATCTTCTAGTGTTGCAGTGCCATTTACAATTGGGAACTTGATTCAGAAGGAGTCAGCAGTGGCAACCCACGTGGAGATAACTGGTATAAAGCTTATGGCAAATACTGCTGCAGCTTTAATATTAAATCCTTCAGTGGAAGGTTGCCAACCATATTCTGTTGGAAGTGATAATCATTCTGATGTAAGTCTCAAACATCAAATTACGGTATCTGCAGAGATGAAGGAGAATGAAGTTGGAGCTGCCGTTGTCTCAGAAATGGTTATTGAATGTGACAGTAATTGGGTCTTGAGAGAAAGCCATAACCCACCAAGGAAGGAAGATGAATTCATGCTGGCTGTGGATTTTCGTTGTCTACATAGTTCAAGCTCCAATGACAAACGCAGCCCCTCTGGGGAGGAAGCTGCATCCTTGAAGGCCATTTATTCTGAGATAGATTCGCCAGTTATCATCGGGGTTGATGATAAAATCTATGCTGAGTATGGATTAAACAAGACACATCCAGCACTGCAGCCAGAGGAGAACACAGTTTCTGTTGCAATGGATCTTGAGAGTGAGGATCCAAGGGGATTGGATGGGTCTGATCCAAAGTTTTGTGCTGCACCTCTTGATCAGGCTAACAGAACAAGCAACCCGAATGCTTCGGAAGTGAGTAGTCGTGTTCTCTGTGGTTTTTCATCAATCTGTGGAAAAAGACCAGAGATGGAAGATGCTATAGCTGTTAAGCCTAAACTTCTTCAAGTTCCTTCAAAGATGCTAACAGATAGCCATGTGAACGATAACACAATATGCTCATTAGCCCACTTTTTCGGTGTCTATGATGGACATGGAGGCTTTCAGGTTGCCAATTACTGCCGGGAACGCCTGCATTCAGCTTTGATTGAGGAGATAGAAGCTGCACAATCAAGTTTGGCAGAAACAGAACTGGGAGATTCTTTACAGGACTATTGGAAGAAAGCATTTGTAAGTTGTTTTCAGAAAGTTGATGATGAAGTTGGAGGAATTCGAGCTGGTAATGGCGGAAATAACATTGGTGGACTAGAGTCTACGATTGAACCAATTGCTCCTGAGACTGCTGGCTCCACTGCAGTGGTTGCCATATTGAATCAATCACACATAATAGTCGCAAATTGTGGGGATTCAAGAGCCGTCTTGTATCGCGGAAAAGAAGCCATTCCATTGTCTGCTGACCACAAACCAAACAGGGAGGATGAGTGGGCAAGGATAGAAGCTGCAGGAGGAAGGGTCATACATTGGCAAGGGTACCGAGTTCTTGGCGTTTTGGCAATGTCAAGATCCATAGGTGATAGGTACTTGAAACCATGTATTATTCCAGAACCGGAAGTGAAGTTTGTGCAACGGGAGAAACATGACGAGTGCCTTATTCTAGCTAGTGATGGTTTATGGGATGTGGTGACAAATGAAGAAGCCTGTGAAGTTGCACGGAAGAGGATCCTTCTTTGGCACAAGAAGTATGGCGAGAATGCGTCAATGACCGAACAAGTTGAAGAAGGAGTTGACCCTGCAGCTCACTCTGCTGCAGAGTATCTCTCTAGACTTGCCCTCCAAAGGGGAAGCAAAGATAACATCTCTGTAATTGTGATAGACTTGAAGGCTCAAAGAAAAATTAAGAGAAAAGCATAA 1653 0.438 MEEISSSVAVPFTIGNLIQKESAVATHVEITGIKLMANTAAALILNPSVEGCQPYSVGSDNHSDVSLKHQITVSAEMKENEVGAAVVSEMVIECDSNWVLRESHNPPRKEDEFMLAVDFRCLHSSSSNDKRSPSGEEAASLKAIYSEIDSPVIIGVDDKIYAEYGLNKTHPALQPEENTVSVAMDLESEDPRGLDGSDPKFCAAPLDQANRTSNPNASEVSSRVLCGFSSICGKRPEMEDAIAVKPKLLQVPSKMLTDSHVNDNTICSLAHFFGVYDGHGGFQVANYCRERLHSALIEEIEAAQSSLAETELGDSLQDYWKKAFVSCFQKVDDEVGGIRAGNGGNNIGGLESTIEPIAPETAGSTAVVAILNQSHIIVANCGDSRAVLYRGKEAIPLSADHKPNREDEWARIEAAGGRVIHWQGYRVLGVLAMSRSIGDRYLKPCIIPEPEVKFVQREKHDECLILASDGLWDVVTNEEACEVARKRILLWHKKYGENASMTEQVEEGVDPAAHSAAEYLSRLALQRGSKDNISVIVIDLKAQRKIKRKA* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g3136 550 Gene3D - 215 550 IPR036457 -
Ahy11g3136 550 SMART PP2C_4 215 538 IPR001932 -
Ahy11g3136 550 PANTHER PROTEIN PHOSPHATASE 2C ABI2-LIKE PROTEIN 119 549 - -
Ahy11g3136 550 ProSitePatterns PPM-type phosphatase domain signature. 272 280 IPR000222 GO:0043169
Ahy11g3136 550 Pfam Protein phosphatase 2C 237 533 IPR001932 -
Ahy11g3136 550 ProSiteProfiles PPM-type phosphatase domain profile. 225 540 IPR001932 -
Ahy11g3136 550 PANTHER ALPHABET, ISOFORM E-RELATED 119 549 - -
Ahy11g3136 550 CDD PP2Cc 226 540 IPR001932 -
Ahy11g3136 550 SUPERFAMILY PP2C-like 219 541 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g3136 Ahy-Chr11 149019600 149022885 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g3136 210 549 PP2C-type Phosphatase Gene Family AT4G26080 60.174 9.87e-136 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g3136 K14497 - gmx:100802159 708.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g3136 11 149019600 149022885 Ahy11g3136 11 149019600 149022885 ECH
Ahy11g3136 11 149019600 149022885 Ahy1g1816 1 94393603 94396871 hybridization
Ahy11g3136 11 149019600 149022885 Ahy13g2282 13 47110623 47114232 PCT
Ahy11g3136 11 149019600 149022885 Ahy3g2005 3 44316710 44320304 PCT
Ahy13g2282 13 47110623 47114232 Ahy11g3136 11 149019600 149022885 PCT
Ahy3g2005 3 44316710 44320304 Ahy11g3136 11 149019600 149022885 PCT