Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g3129 ATGGAACCTCGTGTTGGTAACAAGTTTCGGCTGGGTAGGAAGATCGGTAGCGGCTCCTTTGGGGAGATCTACTTAGGTACTAATATTCAGACTAACGAAGAAGTTGCAATTAAGCTTGAAAATGTCAAGACAAAGCATCCTCAGTTGCTTTACGAATCCAAATTATACAGAATTCTACAAGGAGGAACTGGAATTCCAAATGTTAGATGGTTTGGGGTGGAGGGAGATTACAATGTTCTAGTGATGGATCTGCTTGGACCTAGTCTTGAAGATCTATTCAACTTTTGTAGTAGAAAGCTGTCACTAAAGACTGTTCTTATGCTTGCTGATCAAATGATCAACCGTGTCGAGTTCATCCATTCTAAATCATTTCTACATCGGGATATTAAACCGGATAATTTTCTGATGGGCCTAGGAAGGCGTGCGAATCAGGTTTATGCTATTGATTTTGGTTTGGCTAAGAAATACAGAGATAGTTCAACCCATCAACACATTCCTTACAGGGAAAATAAGAATTTGACTGGAACTGCAAGATATGCTAGCATGAATACTCACCTTGGCATTGAGCAAAGTCGCAGAGATGATTTAGAGTCTCTTGGTTATGTTTTGATGTACTTCCTGAGAGGAAGTCTTCCTTGGCAGGGACTTAAAGCTGGAACAAAGAAACAAAAGTACGAGAAAATCAGTGAAAAAAAAGTTTCTACCTCAATTGAAGCACTATGTCGTGGCTATCCAACTGAATTTGCATCATACTTCCACTACTGCCGCTCATTAAGGTTTGATGATAAGCCAGATTATGCTTATCTCAAAAGGATATTTCGCGACCTCTTTATTCGTGAAGGTTTCCAGTTTGATTATGTGTTTGACTGGACCATCTTGAAGTATCAGCAATCACAACTAGCCACTCCTCCGGCACGGGGCATTGGTCCTAGTGCTGGAACCAGTTCTGGAATGCCACCAGCTGTTATTACTAATCCCGATAGACAGACAGGTGGGGAAGAAGGACGGCCTCCTGGTTTGATTTCGGTGGATTCTTCAAGGCGGAGAATGTCGGGACCCATTTTAAATTCTTTATCAAGTGCCAACATCTTGGGCCAGTCAAGTGGATCATCAAGGCGGGTTGCTGTTTCTGGTAGCCGTGACGCATTTGGTGCTGAGTCAGATATTCGTGCTCGAAATACCGAAGCTAGCCCTGGAGCAGCACATAGAATTACAAGCGGGCAAAGAAGTTCACCAGTTGGATCTTCTGAACCCCAGAGAGTAACAGCATCCGGTAGGCATGGTTCTCACACCAGGAATTATGACAGCGCAGTCAGGGGCATGGAGAATTTGCAATTAGAGACTGATGAGAGGGCTCATTATTAG 1365 0.4322 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFIHSKSFLHRDIKPDNFLMGLGRRANQVYAIDFGLAKKYRDSSTHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRIFRDLFIREGFQFDYVFDWTILKYQQSQLATPPARGIGPSAGTSSGMPPAVITNPDRQTGGEEGRPPGLISVDSSRRRMSGPILNSLSSANILGQSSGSSRRVAVSGSRDAFGAESDIRARNTEASPGAAHRITSGQRSSPVGSSEPQRVTASGRHGSHTRNYDSAVRGMENLQLETDERAHY* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g3129 454 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy11g3129 454 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Ahy11g3129 454 MobiDBLite consensus disorder prediction 360 454 - -
Ahy11g3129 454 MobiDBLite consensus disorder prediction 303 346 - -
Ahy11g3129 454 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
Ahy11g3129 454 SMART serkin_6 9 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy11g3129 454 PANTHER CASEIN KINASE-RELATED 357 433 - -
Ahy11g3129 454 PANTHER CASEIN KINASE-RELATED 1 311 - -
Ahy11g3129 454 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Ahy11g3129 454 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy11g3129 454 MobiDBLite consensus disorder prediction 399 431 - -
Ahy11g3129 454 PANTHER CASEIN KINASE I-LIKE 1 311 - -
Ahy11g3129 454 PANTHER CASEIN KINASE I-LIKE 357 433 - -
Ahy11g3129 454 MobiDBLite consensus disorder prediction 360 375 - -
Ahy11g3129 454 Gene3D Transferase(Phosphotransferase) domain 1 1 307 - -
Ahy11g3129 454 CDD STKc_CK1_delta_epsilon 8 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g3129 Ahy-Chr11 148931561 148935749 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g3129 7 223 EF-hand Containing Proteins AT2G17890 26.667 1.13e-13 71.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Ahy11g3129 Pkinase 1.00E-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g3129 K02218 - gmx:100785851 835.484
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g3129 11 148931561 148935749 Ahy11g3129 11 148931561 148935749 ECH
Ahy11g3129 11 148931561 148935749 Ahy1g1831 1 94768225 94772525 hybridization