Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ahy11g3083 | ATGGAGGACTGTGAGGATTACAAGAATTACTGGGAGACCAACATGTTCCTCCAAACCCAAGAGTTGGACAGCTGGCAATTGGATGAGGCTTTCTCCGGCGGCTACTACGATTCTAGCTCTCCGGACGGCGGAGCTTCATCGGCGGCATCTAAGAACATTGTCTCCGAGAGAAATAGGAGGAAGAAGCTCAATGAAAGGCTCTTTGCACTTAGGGCAGTAGTTCCCAACATCACCAAGATGGATAAGGCATCAATCATAAAGGATGCAATTGATTACATAGAGCACTTGCATGAACAAGAGAGAAGGATTCAAGATGAGATAATGGAGCTTGAATCTGAGAAGCTCAAGAATCCAATTATAGCAGCAGCAGGAGACAATGATTTTGAACAGGATCTTCCCGTTCTTCTCAGATCTAAGAAGAAGAGACCCGATAATCTTCTCTTTGATACCTCAGCTTCTTCTTCCTCAAGAAATAACACCAACTATTTTCCCATTGAACTCATTGATCTGAGGGTAACATACAAGGGAGAGAAGATATTTGTGGTGAGCTTGACATGCAGCAAAAGAACAGATACAATGGTGAAACTGTGTGAGGTCTTTGAATCTTTAAAGCTCAAGATCATCACTGCTAATATTACTTCTTTCTCAGGCACACTCTCCGAGACACTCTTTGTTGAGGCAGATGAAGAAGAAAAAGATCATCTGCTGATAAGGATCCAAACAGCCATTGCAGCTCTTAATGATCCCCAAAGCCCAATGAGCATCTGA | 768 | 0.431 | MEDCEDYKNYWETNMFLQTQELDSWQLDEAFSGGYYDSSSPDGGASSAASKNIVSERNRRKKLNERLFALRAVVPNITKMDKASIIKDAIDYIEHLHEQERRIQDEIMELESEKLKNPIIAAAGDNDFEQDLPVLLRSKKKRPDNLLFDTSASSSSRNNTNYFPIELIDLRVTYKGEKIFVVSLTCSKRTDTMVKLCEVFESLKLKIITANITSFSGTLSETLFVEADEEEKDHLLIRIQTAIAALNDPQSPMSI* | 256 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ahy11g3083 | 255 | PANTHER | TRANSCRIPTION FACTOR SCREAM2-RELATED | 5 | 249 | - | - | |
Ahy11g3083 | 255 | SMART | finulus | 53 | 102 | IPR011598 | GO:0046983 | |
Ahy11g3083 | 255 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 47 | 112 | IPR036638 | GO:0046983 | |
Ahy11g3083 | 255 | Coils | Coil | 93 | 116 | - | - | |
Ahy11g3083 | 255 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 47 | 96 | IPR011598 | GO:0046983 | |
Ahy11g3083 | 255 | PANTHER | TRANSCRIPTION FACTOR BHLH35 | 5 | 249 | - | - | |
Ahy11g3083 | 255 | Gene3D | - | 45 | 114 | IPR036638 | GO:0046983 | |
Ahy11g3083 | 255 | Pfam | Helix-loop-helix DNA-binding domain | 54 | 97 | IPR011598 | GO:0046983 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ahy11g3083 | Ahy-Chr11 | 148467810 | 148471197 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ahy11g3083 | 1 | 226 | Basic Helix-Loop-Helix Transcription Factor Gene Family | AT5G57150 | 58.261 | 2.13e-81 | 242 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | bHLH | Ahy11g3083 | HLH | 7.30E-12 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ahy11g3083 | - | - | adu:107496381 | 459.529 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Ahy11g3083 | 11 | 148467810 | 148471197 | Ahy1g1888 | 1 | 95475491 | 95479052 | hybridization | |
Ahy11g3083 | 11 | 148467810 | 148471197 | Ahy14g1293 | 14 | 30386579 | 30397203 | PCT | |
Ahy11g3083 | 11 | 148467810 | 148471197 | Ahy4g1193 | 4 | 32663745 | 32674701 | PCT | |
Ahy14g1293 | 14 | 30386579 | 30397203 | Ahy11g3083 | 11 | 148467810 | 148471197 | PCT | |
Ahy4g1193 | 4 | 32663745 | 32674701 | Ahy11g3083 | 11 | 148467810 | 148471197 | PCT |