Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g3083 ATGGAGGACTGTGAGGATTACAAGAATTACTGGGAGACCAACATGTTCCTCCAAACCCAAGAGTTGGACAGCTGGCAATTGGATGAGGCTTTCTCCGGCGGCTACTACGATTCTAGCTCTCCGGACGGCGGAGCTTCATCGGCGGCATCTAAGAACATTGTCTCCGAGAGAAATAGGAGGAAGAAGCTCAATGAAAGGCTCTTTGCACTTAGGGCAGTAGTTCCCAACATCACCAAGATGGATAAGGCATCAATCATAAAGGATGCAATTGATTACATAGAGCACTTGCATGAACAAGAGAGAAGGATTCAAGATGAGATAATGGAGCTTGAATCTGAGAAGCTCAAGAATCCAATTATAGCAGCAGCAGGAGACAATGATTTTGAACAGGATCTTCCCGTTCTTCTCAGATCTAAGAAGAAGAGACCCGATAATCTTCTCTTTGATACCTCAGCTTCTTCTTCCTCAAGAAATAACACCAACTATTTTCCCATTGAACTCATTGATCTGAGGGTAACATACAAGGGAGAGAAGATATTTGTGGTGAGCTTGACATGCAGCAAAAGAACAGATACAATGGTGAAACTGTGTGAGGTCTTTGAATCTTTAAAGCTCAAGATCATCACTGCTAATATTACTTCTTTCTCAGGCACACTCTCCGAGACACTCTTTGTTGAGGCAGATGAAGAAGAAAAAGATCATCTGCTGATAAGGATCCAAACAGCCATTGCAGCTCTTAATGATCCCCAAAGCCCAATGAGCATCTGA 768 0.431 MEDCEDYKNYWETNMFLQTQELDSWQLDEAFSGGYYDSSSPDGGASSAASKNIVSERNRRKKLNERLFALRAVVPNITKMDKASIIKDAIDYIEHLHEQERRIQDEIMELESEKLKNPIIAAAGDNDFEQDLPVLLRSKKKRPDNLLFDTSASSSSRNNTNYFPIELIDLRVTYKGEKIFVVSLTCSKRTDTMVKLCEVFESLKLKIITANITSFSGTLSETLFVEADEEEKDHLLIRIQTAIAALNDPQSPMSI* 256
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g3083 255 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 5 249 - -
Ahy11g3083 255 SMART finulus 53 102 IPR011598 GO:0046983
Ahy11g3083 255 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 47 112 IPR036638 GO:0046983
Ahy11g3083 255 Coils Coil 93 116 - -
Ahy11g3083 255 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 47 96 IPR011598 GO:0046983
Ahy11g3083 255 PANTHER TRANSCRIPTION FACTOR BHLH35 5 249 - -
Ahy11g3083 255 Gene3D - 45 114 IPR036638 GO:0046983
Ahy11g3083 255 Pfam Helix-loop-helix DNA-binding domain 54 97 IPR011598 GO:0046983
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Ahy11g3083 Ahy-Chr11 148467810 148471197 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g3083 1 226 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G57150 58.261 2.13e-81 242
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy11g3083 HLH 7.30E-12 No_clan
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g3083 - - adu:107496381 459.529
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g3083 11 148467810 148471197 Ahy1g1888 1 95475491 95479052 hybridization
Ahy11g3083 11 148467810 148471197 Ahy14g1293 14 30386579 30397203 PCT
Ahy11g3083 11 148467810 148471197 Ahy4g1193 4 32663745 32674701 PCT
Ahy14g1293 14 30386579 30397203 Ahy11g3083 11 148467810 148471197 PCT
Ahy4g1193 4 32663745 32674701 Ahy11g3083 11 148467810 148471197 PCT