Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g3076 ATGAGGGATGGCAAGAAGTCAAATAATAGAGGGTTGCAAAAGTCCATTCATCCAAAGGCAAAAACTGAGTCAAAGCTAAATTCATCCTTGAGAGTCAAATCAAAAAGCACAAAGTGCCAAGGGAAGAAGCATAAGCTGAAACCAAAATCTCACATGCAAAGAAATGCATCTAACATGTCAAGGAAGAGAGCTACTGACCCTTCCATCAAAGGGCCTAACAAGGAGCCTTCAAAAAAGAAATTGATTATTAGGTTTAGTTTGCATGAAACTGATGATAAATCTTCAAAGAAGTTGTCCTCAAAGCTAAAGGGTGAAAAGGTTTCTTTTAGGTCTAAAGAAGAGGGTAAAGATGTTGATGGCAAGGTAAAGCTTCAAAACAGAAAGAGAAAGAGAAAAAAGAAAAGGCAGAGGAATAATGCAGATATCGATGATGCTTCTCGCCTCAAGAGGAGAACGAGATATCTATTAATCAAAATGAAGCTAGAGCAGAACCTTATTGATGCTTACTCTGGAGAAGGTTGGAAAGGCCAGAGTCGAGAAAAGATTAGGCCAGAAAAGGAGCTACAAAGAGCGCGAAAGCAGATTTTAAAATGTAAACTTAGTATTCGTGATGCTATTCACCAGTTGGATTCTCTTAGTTCGTTGAATAACAGCGAAGATTCTGTCATTGTTCCAGATGGATCTAACTGCCATGAACATAAATACTGTCAGAAGTGCAACTTGCGAGAAGCTCTTCGAGATAAGGATATTATACGATGTGATGGTACATGCAATCGCACTTTTCACAAAAAATGTCTTGATCCTGCCTTAGACACTGAAAATATTCCTCCTGGAGAACATGGCTGGCTTTGCAAGTTTTGTGGATGTAAGATGGAAATACTGGGGGCAATGAATGCTCATCTTGGAACTCACTTCTCCTTACACAGTACTTGGCAGGATGTATTCAAAGAAGAGGCTGCTAAACCTGATGGTGATACTGCATTACTGAACCCTGAGGAAGAATGGCCGTCAGATGATTCTGAAGACGATGATTATGATCCGGAGAGGAGAGAGGACTGCCATAACATCAACACAGAAGGAAGCAATGATGATGCATCTAATAATTTAAGCAGTTCTACCAGTTTATGTTCTTCGGATGGTGAATGTTCTCTAGTAGATGAAGGTTTCAACCATGAATATTCATCTCTTGATGGATGCATAGATTCTAATGAATCTGAGGACAATGTCTGTGGCCCCAGGCAGCGAAAAACAGTTGACTACAAGCAACTTTATGATGAAATGTTTGGGAAGGATGCTGCTGCATGTGAACAAGTGAGTGAAGATGAAGACTGGGGTCCTACTAAAAGAAAGCGACGAGACAAGGAGTCTGATGCTGTTGATACTCTTATGACTTTGCATGAATGCCAGAATAGAATTCACAATAGTGAGAACATCAACATGGAACGAGAAGGTTCTCCGAGCAAACAAATCAAGAGGTCTTGTTTTCGGATTCCTCGTGAAGCAGTTGAGAAGCTTCGCCAAGTCTTTGCAGAGAATGAACTTCCTCCAAGATCCACGAAGTTGGCTCTCTCGAAAGAGTTGGGACTTGATATTGAGAAGGTTAACAAATGGTTCAAAAATGCACGTTACTCGGCACTCAAAAGCAGAAAGCAACACACAGAGGGAGCTGATCCGCCTCAGACTTCTGGTTCAAAGGATAACAGGTTACAAGACCCGGAGAGAGCTGAGGTTTCGAAACCAAAGGCATCAAAAAATATTATTAATCATTCTCTGAAGAATGGTAAGGCTGTTAATGGTAGAAAGAAAAGACGATCAGAAGTATCTCCAACCCAGCGAGAAAAGGGCGATAAGGAGTTGGAGGAGCTCAGTGATGATGTATGCTTGATGAAACTGTTGAAAAATAAAAAGAAGAGGTTGAACTCTGCATTTGAAGGGCACTCACATACAGCAGAGTTGGAGTTTGAAAAACTGAGCAAAGTGAAGGCTAAATTGGATAATTTGAGGCAAAAATTAACTGCAATTCTAAATTACAGGGCAAATGCTTCTAATGCATCCCATTCTAATGAACCATCAATTATGTATGTGCCCACTGCTGTGTTAAGGGAAAAGGTTGCATAG 2118 0.4051 MRDGKKSNNRGLQKSIHPKAKTESKLNSSLRVKSKSTKCQGKKHKLKPKSHMQRNASNMSRKRATDPSIKGPNKEPSKKKLIIRFSLHETDDKSSKKLSSKLKGEKVSFRSKEEGKDVDGKVKLQNRKRKRKKKRQRNNADIDDASRLKRRTRYLLIKMKLEQNLIDAYSGEGWKGQSREKIRPEKELQRARKQILKCKLSIRDAIHQLDSLSSLNNSEDSVIVPDGSNCHEHKYCQKCNLREALRDKDIIRCDGTCNRTFHKKCLDPALDTENIPPGEHGWLCKFCGCKMEILGAMNAHLGTHFSLHSTWQDVFKEEAAKPDGDTALLNPEEEWPSDDSEDDDYDPERREDCHNINTEGSNDDASNNLSSSTSLCSSDGECSLVDEGFNHEYSSLDGCIDSNESEDNVCGPRQRKTVDYKQLYDEMFGKDAAACEQVSEDEDWGPTKRKRRDKESDAVDTLMTLHECQNRIHNSENINMEREGSPSKQIKRSCFRIPREAVEKLRQVFAENELPPRSTKLALSKELGLDIEKVNKWFKNARYSALKSRKQHTEGADPPQTSGSKDNRLQDPERAEVSKPKASKNIINHSLKNGKAVNGRKKRRSEVSPTQREKGDKELEELSDDVCLMKLLKNKKKRLNSAFEGHSHTAELEFEKLSKVKAKLDNLRQKLTAILNYRANASNASHSNEPSIMYVPTAVLREKVA* 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g3076 705 MobiDBLite consensus disorder prediction 67 124 - -
Ahy11g3076 705 ProSiteProfiles Zinc finger PHD-type profile. 233 290 IPR019787 -
Ahy11g3076 705 MobiDBLite consensus disorder prediction 1 28 - -
Ahy11g3076 705 MobiDBLite consensus disorder prediction 322 370 - -
Ahy11g3076 705 MobiDBLite consensus disorder prediction 36 51 - -
Ahy11g3076 705 SUPERFAMILY Homeodomain-like 491 555 IPR009057 -
Ahy11g3076 705 ProSitePatterns Zinc finger PHD-type signature. 236 287 IPR019786 -
Ahy11g3076 705 CDD PHD_PRHA_like 235 287 IPR045876 -
Ahy11g3076 705 SUPERFAMILY FYVE/PHD zinc finger 227 292 IPR011011 -
Ahy11g3076 705 PANTHER BNAA01G07010D PROTEIN 90 569 - -
Ahy11g3076 705 Coils Coil 650 670 - -
Ahy11g3076 705 SMART HOX_1 488 552 IPR001356 GO:0003677
Ahy11g3076 705 MobiDBLite consensus disorder prediction 437 457 - -
Ahy11g3076 705 MobiDBLite consensus disorder prediction 600 619 - -
Ahy11g3076 705 MobiDBLite consensus disorder prediction 1 144 - -
Ahy11g3076 705 MobiDBLite consensus disorder prediction 547 619 - -
Ahy11g3076 705 Pfam Homeodomain 498 543 IPR001356 GO:0003677
Ahy11g3076 705 Gene3D - 490 556 - -
Ahy11g3076 705 MobiDBLite consensus disorder prediction 332 346 - -
Ahy11g3076 705 ProSiteProfiles 'Homeobox' domain profile. 488 548 IPR001356 GO:0003677
Ahy11g3076 705 SMART PHD_3 235 288 IPR001965 -
Ahy11g3076 705 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 176 296 IPR013083 -
Ahy11g3076 705 CDD homeodomain 491 552 IPR001356 GO:0003677
Ahy11g3076 705 PANTHER POLYCOMB-LIKE TRANSCRIPTION FACTOR 90 569 - -
Ahy11g3076 705 Pfam PHD-finger 235 289 IPR019787 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g3076 Ahy-Chr11 148393312 148398275 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g3076 138 559 Homeobox Transcription Factor Family AT4G29940 56.512 6.24e-147 445
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-PHD Ahy11g3076 Homeodomain 2.40E-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g3076 - - gmx:100817639 811.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g3076 11 148393312 148398275 Ahy1g1899 1 95638543 95643576 hybridization