Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g3048 ATGAAATACATTCGGACCAGCAGCTTGAAGAGGCTCTTCTCTCTGAAAAGGCGTAGTTTTGGAGACCAATCTCTGAGCCGGAGCGGTTCAACCGGTGGTGAAAACTTATATAAGGGCTCAGATATTGTTCTTCTTCCACATGAACAACATTGTTCACCAAGACCCTCTTGGAAGTGCTTCTCCTATGAAGAACTTTTTGATGCCACCAATGGTTTCAGCTCAGAGAATTTGGTTGGAAAAGGAGGGTATGCAGAGGTATACAAGGGAACACTGAAGGATGGAGAGAAGATTGCAGTGAAGAGGCTCACAAGAACTTGCAGAGATGAGAGGAAAGAGAAAGAGTTTCTAACAGAGATTGGTACAATCGGTCATGTCCACCATAACAATGTTTTGCCTCTTCTTGGTTGTTGTATTGACAATGGCCTTTACCTTGTTTTCATGCTATCTACCAGAGGCTCTGTTGCATCCCTTCTTCATGATGAAAAGTTGGATACTTTGGATTGGAAAACAAGGCATAAGATAGCTGTTGGAACTGCACGTGGCCTCCATTACTTGCACAAAGGTTGCAAGAGAAGGATAATCCACCGAGACATTAAGGCATCAAATATTCTTTTGACAGAAGATTTTGAACCTCAGATATCTGATTTTGGATTAGCAAAATGGCTTCCATCTCAATGGAGTCATCATTCAATTGGCCCAATAGAAGGGACATTTGGTCATTTGGCACCAGAATACTATCTGCATGGAGTTGTGGATGAGAAGACAGATGTATTTGCTTTTGGTGTGTTCTTGCTTGAACTCATTTCTGGAAGAAAACCGGTTGATGGGTCTCACCAAAGCTTGCATACTTGGGCAAAACCAATATTGAAGAAAGGGGAGGAAGAGAAGCTTGTGGATCCAAGGCTTGAAGGGGAGTATGATGGAGGAGAGTTAAAGAGACTTGCCTTTGCAGCATCCTTGTGCATTCGAGCTTCTTCAATTTGGCGACCAACCATGACTCAGGTATTAGAGGTAATGGAAGAGGGTGAAATTGACAAAGAGAAGTGGAAAATGCCAGAGGAAGAAGAAGAGGAAGATGAAGAGGAAGAGTTTTGGGGTTTTGATGATCTTGAATATGAATATGACACTTCATTATCAATGTCACTACCTGATTCCACTGCAAGTACATATATTTAG 1176 0.4209 MKYIRTSSLKRLFSLKRRSFGDQSLSRSGSTGGENLYKGSDIVLLPHEQHCSPRPSWKCFSYEELFDATNGFSSENLVGKGGYAEVYKGTLKDGEKIAVKRLTRTCRDERKEKEFLTEIGTIGHVHHNNVLPLLGCCIDNGLYLVFMLSTRGSVASLLHDEKLDTLDWKTRHKIAVGTARGLHYLHKGCKRRIIHRDIKASNILLTEDFEPQISDFGLAKWLPSQWSHHSIGPIEGTFGHLAPEYYLHGVVDEKTDVFAFGVFLLELISGRKPVDGSHQSLHTWAKPILKKGEEEKLVDPRLEGEYDGGELKRLAFAASLCIRASSIWRPTMTQVLEVMEEGEIDKEKWKMPEEEEEEDEEEEFWGFDDLEYEYDTSLSMSLPDSTASTYI* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g3048 391 SMART serkin_6 72 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy11g3048 391 Gene3D Phosphorylase Kinase; domain 1 46 147 - -
Ahy11g3048 391 ProSiteProfiles Protein kinase domain profile. 72 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy11g3048 391 Coils Coil 99 119 - -
Ahy11g3048 391 Pfam Protein tyrosine and serine/threonine kinase 75 280 IPR001245 GO:0004672|GO:0006468
Ahy11g3048 391 ProSitePatterns Protein kinases ATP-binding region signature. 78 100 IPR017441 GO:0005524
Ahy11g3048 391 SUPERFAMILY Protein kinase-like (PK-like) 50 339 IPR011009 -
Ahy11g3048 391 PANTHER OS08G0249100 PROTEIN 46 371 - -
Ahy11g3048 391 Gene3D Transferase(Phosphotransferase) domain 1 150 365 - -
Ahy11g3048 391 ProSitePatterns Serine/Threonine protein kinases active-site signature. 193 205 IPR008271 GO:0004672|GO:0006468
Ahy11g3048 391 PANTHER OS04G0654600 PROTEIN 46 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g3048 Ahy-Chr11 148087863 148093353 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g3048 56 335 Trihelix Transcription Factor Family AT1G68690 46.713 8.42e-74 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Ahy11g3048 PK_Tyr_Ser-Thr 2.80E-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g3048 - - ahf:112697971 783.097
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g3048 11 148087863 148093353 Ahy11g3048 11 148087863 148093353 ECH
Ahy11g3048 11 148087863 148093353 Ahy1g1928 1 95988377 95992850 hybridization