Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ahy11g3044 | ATGGACTCTTCCTCTTCTTTCTCTCTCTCCAACCACTCTTCTTCCTCTCCTCTCTCCCTCTTCCACCCCTCCTTCACCGACGCCGCCGATGTCCGATCAACTAACCTCTCCATATTCACCGGGGTCCCCAAGTTCGAGGACTTCCTCGGTGCCTCCGCTGCAACTGCACCCACCGCCACAGCACCATGTGCACCACCGCCCCCGCCCCCGCCGCCGCCGCAGCTTGCTCGGTTCTCCACCGACAACAACGGCGTCGTATATGACTCTGAGCTGAAGACAACGATAACCGCCTGCTTCCCTGGCGGTTTCGGCGGCGGAGCTGCAACTGGCGCTGAACTGAGTCAGAGGCCATCTCCAAAGAAAACTGTGGACACCTTCGGCCAACGCACCTCCATCTACCGCGGAGTCACAAGACATAGATGGACAGGGAGATATGAAGCTCATCTATGGGATAACAGCTGCAGAAGGGAAGGGCAAAGTAGGAAAGGAAGACAAGTTTATTTGGGTGGCTATGACAAGGAAGAGAAAGCGGCCAGAGCTTATGATCTCGCTGCTCTCAAGTACTGGGGTCCAACCACTACCACCAACTTTCCGGTTTCCAACTATGAGAAGGAGCTAGAGGAAATGAAGAACATGACAAGACAAGAGTTTGTTGCTTCTCTAAGAAGGAAGAGCAGTGGATTCTCTAGGGGGGCGTCTATATACAGAGGAGTGACTAGGCACCACCAGCATGGGCGATGGCAGGCAAGAATAGGCAGAGTAGCCGGAAACAAAGACCTGTACCTTGGCACTTTCAGCACGCAAGAAGAAGCTGCAGAGGCTTATGACATTGCAGCAATAAAATTCAGAGGACTCAACGCAGTCACCAACTTCGACATGAGTCGCTACGACGTCAAGAGCATTGCTAGCAGCACCCTTCCCATCGGCGGACTATCAAACAAGAACAAGAACTCCGCCGATGACCCTGTCGTCAGTCAACCACCACCACCACCACCGCCACCTTCAAGCTCCACCCTCAGCTTCGCCATTCCCATCAAACAAGACCCGTCCGCAGATTACTGGTCCATCATAGGCTACTCCAATAACACACAGCTGGAAAGTGCCAGGGGTACAACTGTAATTGCACCAGCAGCAACCTCTTTTCCTCGTCCCAACAACAATGGCAATGGCATGATGGACTTCTCCGCTGCCCCTTCAGCGGACGGATTCTTGAACGGAGGAGGGATCTTTGTTCATCATCATCAACAAGAGAGTGGTGGTGGTTCATCACCATCTTCGGGTGGTTCTTCAATCCCATTGGCAACGCCAATATTTACCTTAAATAGCAACAATAATTATGAGAACTGGATTGGGCCAACACTGCACACATTCCAAGCTCATGCAAAACCCAGTCTCTTTCAAACGCCAATATTTGGAATGGAATGA | 1425 | 0.5214 | MDSSSSFSLSNHSSSSPLSLFHPSFTDAADVRSTNLSIFTGVPKFEDFLGASAATAPTATAPCAPPPPPPPPPQLARFSTDNNGVVYDSELKTTITACFPGGFGGGAATGAELSQRPSPKKTVDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVYLGGYDKEEKAARAYDLAALKYWGPTTTTNFPVSNYEKELEEMKNMTRQEFVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKSIASSTLPIGGLSNKNKNSADDPVVSQPPPPPPPPSSSTLSFAIPIKQDPSADYWSIIGYSNNTQLESARGTTVIAPAATSFPRPNNNGNGMMDFSAAPSADGFLNGGGIFVHHHQQESGGGSSPSSGGSSIPLATPIFTLNSNNNYENWIGPTLHTFQAHAKPSLFQTPIFGME* | 475 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ahy11g3044 | 474 | Gene3D | AP2/ERF domain | 234 | 294 | IPR036955 | GO:0003700|GO:0006355 | |
Ahy11g3044 | 474 | Gene3D | AP2/ERF domain | 132 | 200 | IPR036955 | GO:0003700|GO:0006355 | |
Ahy11g3044 | 474 | MobiDBLite | consensus disorder prediction | 60 | 76 | - | - | |
Ahy11g3044 | 474 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR BBM | 111 | 321 | - | - | |
Ahy11g3044 | 474 | SUPERFAMILY | DNA-binding domain | 131 | 200 | IPR016177 | GO:0003677 | |
Ahy11g3044 | 474 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Ahy11g3044 | 474 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 111 | 321 | - | - | |
Ahy11g3044 | 474 | MobiDBLite | consensus disorder prediction | 307 | 322 | - | - | |
Ahy11g3044 | 474 | MobiDBLite | consensus disorder prediction | 323 | 338 | - | - | |
Ahy11g3044 | 474 | ProSiteProfiles | AP2/ERF domain profile. | 132 | 198 | IPR001471 | GO:0003700|GO:0006355 | |
Ahy11g3044 | 474 | ProSiteProfiles | AP2/ERF domain profile. | 234 | 292 | IPR001471 | GO:0003700|GO:0006355 | |
Ahy11g3044 | 474 | SUPERFAMILY | DNA-binding domain | 233 | 294 | IPR016177 | GO:0003677 | |
Ahy11g3044 | 474 | CDD | AP2 | 131 | 200 | IPR001471 | GO:0003700|GO:0006355 | |
Ahy11g3044 | 474 | MobiDBLite | consensus disorder prediction | 307 | 341 | - | - | |
Ahy11g3044 | 474 | CDD | AP2 | 233 | 294 | IPR001471 | GO:0003700|GO:0006355 | |
Ahy11g3044 | 474 | SMART | rav1_2 | 234 | 298 | IPR001471 | GO:0003700|GO:0006355 | |
Ahy11g3044 | 474 | SMART | rav1_2 | 132 | 204 | IPR001471 | GO:0003700|GO:0006355 | |
Ahy11g3044 | 474 | MobiDBLite | consensus disorder prediction | 57 | 80 | - | - | |
Ahy11g3044 | 474 | Pfam | AP2 domain | 234 | 284 | IPR001471 | GO:0003700|GO:0006355 | |
Ahy11g3044 | 474 | Pfam | AP2 domain | 132 | 190 | IPR001471 | GO:0003700|GO:0006355 | |
Ahy11g3044 | 474 | PRINTS | Ethylene responsive element binding protein signature | 133 | 144 | IPR001471 | GO:0003700|GO:0006355 | |
Ahy11g3044 | 474 | PRINTS | Ethylene responsive element binding protein signature | 274 | 294 | IPR001471 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ahy11g3044 | Ahy-Chr11 | 148034106 | 148037283 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ahy11g3044 | 68 | 474 | AP2-EREBP Transcription Factor Family | AT5G57390 | 55.856 | 8.15e-147 | 425 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-AP2 | Ahy11g3044 | AP2 | 3.40E-13 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ahy11g3044 | K09285 | - | gmx:100797828 | 620.928 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Ahy11g3044 | 11 | 148034106 | 148037283 | Ahy11g3044 | 11 | 148034106 | 148037283 | ECH | |
Ahy11g3044 | 11 | 148034106 | 148037283 | Ahy1g1931 | 1 | 96030032 | 96033166 | hybridization |