Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g3028 ATGGATACTGGAGAGGAGTACTCACTTGTTATTGAACTATCTGAAAACGATCTTTTCTTTGAACAAAAGAAGAAATTACTAGAAAATAAGGGTTTTCGACCCAAGGAACGAATATACCTCAAGGATACCTCAAAGCCTGGTTGGGTGAATGCTACCGTAAAGGTTTTACTGCAGATTGCGCGAATTATACAGTTAAATGAGCTGGAACTTTATTTTGCCGAAGATGATGGATGTCCTTTAGTGGAGTTTTACAGCCCCAGGAATGAGTTAGAGGCTTTCGATTCAATTCTTTCACTTGTTGACATATCACTTTCTTCTTGTACAAATCTCCATACAAATATCCTGGAATTGTTACGACAAACAATTCTTGATTTGATTTCTGATTTTGGGGATAAGAATAGTGTGAAGGGAATAGTTGAAAGAGACCATGGTATTGACCAGGAAGAACGCCTGATAAAATGGGCAGAAAGCAATGGTGTAAGGACACAGCTAAAAATTGCTTATGTCCAAGGTGCAGGACGTGGTGCAATAGCGAGGGAGGATCTCAAAGTTGGAGACATTGCTTTAGAAATTCCTAGTTCCATTATCATTTCCGAGGAGCTTGTTTGTGAAACTGATATGTATCATGTCTTAAAAGAGGTTGATGGCATATCTTCAGAAACAATATTGCTGCTGTGGAGTATGAAAGAGAAGTACAACGTCAATTCAAAATTCAAAACATACTTTGACACACTCCCGGAAAACTTCAATACAGGATTGAGTTTTGGCATTGAAGCAATTACAATGTTAGATGGAACCTTGCTGTTGGAAGAGATAATGCAAGCAAGACAGCACCTGCATGCTCAGTATGACGAGTTGTTCCCTGCTTTGTGTAACAACTTCCCTGAGATATTTCCAGTAGAGCTGTATACATGGGAGAAATTTTTATGGGCTTGTGAACTTTTTTACTCCAATAGCATGAAGATAATGTTCCCTGATGGAAAGCTGACGACATGCTTGATCCCTATAGCTGGCTTTCTTAATCATTCACTGTGCCCACATATTTTGCACTATGGCAAAGTAGATGCTACTACAAATTCATTGAAATTTCGGCTATCAAGACCATGCAAATCTGGAGAAGAATGCTGCTTAAGCTATGGGAACTTCTCCAGTTCTCATCTAATTACCTTCTATGGTTTCTTACCGCGAGGAGACAACCCATATGATACCATTCCATTAGATATTGATGGTTCTGATGTTGATTATGTTGAGGATAAATGCCCGCCCAACTGGACGACTCACATGGTGCGTGGTACTTGGCTCTCCAACAATCACAGCCTATTCTATTATGGCCTTCCCTCTCCATTATTGGACCATCTTCGGAGATCTCGAAGTCCCATGCTGAATACGAAGACCTTGTTGCAAGAAAACTTGGAAAATGAGCTGCAAATTCTTGAAGATCTAATATATATATTTGATGACATGATTGACAACATGGGTGAGACCGATTTTGATGACAGAGAAAACTGCAGCTGGGATGGAAAATTGGCAATGGATTTTAAGAATCTACAAAGACGAATTGCGTGTTCTGTTTCAAGCTCATGTCATAATGGTGTCAACATGTTGACGAATGAATTAAACAAGTGCATGGCTGAGGACACACGAGGCTAA 1650 0.397 MDTGEEYSLVIELSENDLFFEQKKKLLENKGFRPKERIYLKDTSKPGWVNATVKVLLQIARIIQLNELELYFAEDDGCPLVEFYSPRNELEAFDSILSLVDISLSSCTNLHTNILELLRQTILDLISDFGDKNSVKGIVERDHGIDQEERLIKWAESNGVRTQLKIAYVQGAGRGAIAREDLKVGDIALEIPSSIIISEELVCETDMYHVLKEVDGISSETILLLWSMKEKYNVNSKFKTYFDTLPENFNTGLSFGIEAITMLDGTLLLEEIMQARQHLHAQYDELFPALCNNFPEIFPVELYTWEKFLWACELFYSNSMKIMFPDGKLTTCLIPIAGFLNHSLCPHILHYGKVDATTNSLKFRLSRPCKSGEECCLSYGNFSSSHLITFYGFLPRGDNPYDTIPLDIDGSDVDYVEDKCPPNWTTHMVRGTWLSNNHSLFYYGLPSPLLDHLRRSRSPMLNTKTLLQENLENELQILEDLIYIFDDMIDNMGETDFDDRENCSWDGKLAMDFKNLQRRIACSVSSSCHNGVNMLTNELNKCMAEDTRG* 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g3028 549 SUPERFAMILY SET domain 147 401 IPR046341 -
Ahy11g3028 549 Coils Coil 461 481 - -
Ahy11g3028 549 CDD SET_LSMT 164 394 - -
Ahy11g3028 549 Gene3D set domain protein methyltransferase, domain 1 146 394 - -
Ahy11g3028 549 Gene3D - 3 127 IPR036464 -
Ahy11g3028 549 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 10 545 - -
Ahy11g3028 549 PANTHER BNAA07G01600D PROTEIN 10 545 - -
Ahy11g3028 549 ProSiteProfiles SET domain profile. 162 380 IPR001214 GO:0005515
Ahy11g3028 549 Pfam SET domain 173 380 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g3028 Ahy-Chr11 147919990 147925910 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Ahy11g3028 SET 1.60E-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g3028 K19199 - gmx:100778605 885.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g3028 11 147919990 147925910 Ahy1g1944 1 96161609 96175613 hybridization