Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g3021 ATGGAACCAACAAGAAACCTTGATCATCATCACGGTGGTGACCATCACTTTATTTTCCGTTCCAAGTTGCCCGACATTTACATCCCAACCCACCTCCCTCTCCACACTTACTGCTTTCAGAATCTCTCCCACTTCAAGGACCGTCCTTGCCTCATCAACGCCACCACCGGCGATACTTTCACCTACGCCGCCGTCGAACTAACCGCCAGAAAAGTCGCCGCCGGACTCAACAACCTAGGTGTTCGTCAAGGCGACGTCATCCTCCTCCTCCTCCAGAACTGCCACCAGTTTGTCTTCGCCTTCCTTGGCGCCTCCTACCGTGGCGCCATCGTCACCACCGCCAACCCGTTCTACACCCCCGCCGAGGTCGCCAAGCAGGCCACCGCCTCCGCTGCTAAGCTCATAATAACTCAGTCGTCCTTCGTCGACAAGGTAAAGGATCTGGCCAGGGACAAACACATCAAGGTCGTGTGCATCGACGCGCCGCCGCAGGGGTGCCTTGACTTCTCGGAGCTAACGGAGGCGGATGAGGGCGACATCCCTGCCGTCAAAATCTGCCCGGATGATGTAGTTGCGCTACCGTATTCGTCCGGCACGACGGGGCTCCCAAAAGGGGTGATGCTAACACACAAAGGGTTAGTGACGAGCGTGGCGCAGCAGGTGGACGGAGAGAACCCCAATTTGTACATTAAGCGCGACGATGTGGTGGTTTGCGTGCTTCCGCTGTTCCACATTTACTCGCTGAATTCGGTTCTGCTGTGCGGGCTTCGAGTAGGGGCTGCAATCGTAATAATGCACAAGTTTGAGGTGGTGGGGCTGCTTCAAGTGGTTGAGAAGCACAGGGTGAGCGTTGCGCCATTAGTGCCTCCGATCGTTCTGGCGATAGTAAAGAGCGGGGAGGTGACACGCTACGACTTATCGTCCATTCGGATGGTGATGTCCGGTGCGGCCCCATTGGGTAAGGACCTTCACGATGCTTTCAGGGACATGCTTCCTAATGCCACCTTTGGTCAGGGTTATGGGATGACGGAAGCAGGTCCGGTGCTTTCGATGTGCTTAGCGTTTGCAAAGGAACCTTTTGAGGTGATATCATCAGGTGCGTGCGGGACCGTCGTAAGAAACGCAGAGATGAAGATTGTAGATCCTCTCACTGCTGCTTCCCTCCCCAGAAATCATGCCGGTGAGATTTGCATCAGAGGCAACCAGATTATGAAAGGTTACTTAAACGACCCTAAGGCGACAGAAGATACCATAGACAAAGAGGGATGGTTGCACACGGGTGATATAGGATATATCGACGACAACGATGAGCTATTCATCGTTGACCGCTTAAAGGAGTTGATCAAATACAAAGGATTTCAAGTGGCTCCCGCTGAGCTCGAAGCTATGTTGATTTCTCACCCTAACCTTTCCGATGCAGCTGTTATAGCCATGAAAGATGAGGCAGCAGGAGAGGTTCCTGTTGCATTTGTTGTAAGATCAAACGCGTCTAAGATATCGGAGGATGAAATCAAGCTATATATCTCAAAGCAGGTTGTATTTTACAAGAGAATCAACAAAGTTTTCTTTGTGGATTCAATCCCAAAGGCACCGTCAGGTAAGATTTTACGAAAACACCTCAGAGCAAGGCTTGCATCTGGCCTTGAAATTTAG 1653 0.5185 MEPTRNLDHHHGGDHHFIFRSKLPDIYIPTHLPLHTYCFQNLSHFKDRPCLINATTGDTFTYAAVELTARKVAAGLNNLGVRQGDVILLLLQNCHQFVFAFLGASYRGAIVTTANPFYTPAEVAKQATASAAKLIITQSSFVDKVKDLARDKHIKVVCIDAPPQGCLDFSELTEADEGDIPAVKICPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYIKRDDVVVCVLPLFHIYSLNSVLLCGLRVGAAIVIMHKFEVVGLLQVVEKHRVSVAPLVPPIVLAIVKSGEVTRYDLSSIRMVMSGAAPLGKDLHDAFRDMLPNATFGQGYGMTEAGPVLSMCLAFAKEPFEVISSGACGTVVRNAEMKIVDPLTAASLPRNHAGEICIRGNQIMKGYLNDPKATEDTIDKEGWLHTGDIGYIDDNDELFIVDRLKELIKYKGFQVAPAELEAMLISHPNLSDAAVIAMKDEAAGEVPVAFVVRSNASKISEDEIKLYISKQVVFYKRINKVFFVDSIPKAPSGKILRKHLRARLASGLEI* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g3021 550 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 14 544 - -
Ahy11g3021 550 Pfam AMP-binding enzyme 41 450 IPR000873 -
Ahy11g3021 550 CDD 4CL 28 540 - -
Ahy11g3021 550 Gene3D - 445 546 IPR045851 -
Ahy11g3021 550 PANTHER 4-COUMARATE:COA LIGASE-LIKE PROTEIN 14 544 - -
Ahy11g3021 550 SUPERFAMILY Acetyl-CoA synthetase-like 14 546 - -
Ahy11g3021 550 Pfam AMP-binding enzyme C-terminal domain 459 534 IPR025110 -
Ahy11g3021 550 Gene3D - 10 444 IPR042099 -
Ahy11g3021 550 ProSitePatterns Putative AMP-binding domain signature. 193 204 IPR020845 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g3021 Ahy-Chr11 147874025 147879106 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g3021 9 512 Monolignol Biosynthesis Gene Families AT1G51680 68.031 0.0 693
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g3021 K01904 - gmx:100779668 877.856
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g3021 11 147874025 147879106 Ahy11g3021 11 147874025 147879106 ECH
Ahy11g3021 11 147874025 147879106 Ahy1g1952 1 96248104 96252118 hybridization