Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g3020 ATGAGCTATATAATAAACTCACACAGCACTATTATCACTATCCCAAACCAACACAAACAAAAAAAACCAAAAAAAAAAACTAACACAAACAAAACATCGGAAATGGAATCTGCTACTGCCGCTCCCACTCAACAAGAATTCATCTTCCGATCCAAGCTTCCTGACATTCCCATCCCCACCCACCTTCCTCTCCATTCTTACTGCTTTCAGAATCTTCCACTCTTCCATGACCGCCCATGCCTCATCGACGCCGAAACCGCCACCACCCTAACCTATGCCGACGTCCACCTCGCCACCCGCCGCATCTCCGCCGGTCTCCACTCCATCGGCATCCGCAAGGGTGACGTCATCATGCTCGTCCTCCGCAACTGCCCCGAATTCGCCCTCGCTTTCCTTGGCGCCTCCCGCTGCGGCGCCCCTGTCACGACCGCCAACCCCTTCTACACTCCCGCCGAGCTGGCCAAGCAAGCCACCGCCACCAAAACTAAGCTCATCATAACGCAATCCGCGTACGTAGAGAAATTCAAAGAGTACCTGGAAACTAACAACAACGACGTCAAGATCATGTGCATTGATGGTTCCCCTGAAGAATCACAGGACACTAGTGTTCTGCACTTTTCCCTTCTCACAAATTCCAATGAAAACGACGAGCCTGAAGTTAACATCACCACCGACGATCTCGTGGCGATCCCGTTCTCCTCCGGGACATCGGGGCTGCCAAAGGGGGTGATGTTAACGCACAGCAACCTGGTTACCACGGTGGCGCAACTTGTTGACGGCGAGAATCCTCATCAGTACACGCACAGCGAGGACGTTCTCCTCTGCGTGCTGCCAATGTTTCACATATACGCACTGAACTCGATCTTGTTATGTGGCATTCGAGCGGGTGCGGCGGTTCTGATCGTGCAGAAGTTTGAGATAACGACTCTGATGGAGTTGATAGAGAAGTACAGGGTGACGGTGGCGTCTCTGGTGCCGCCGATAGTGTTGGCGGTGGTGAAGAGTGGGGATACTCACAGGTATGATCTGTCTTCGATTCGTGGGGTGATATCAGGTGCCGCTCCCATGGGAATGGAGCTTCAGGAAGCTGTCAAGGCTAGGCTTCCCCATGCCATTCTCGGACAGGGTTATGGGATGACAGAAGCGGGGCCACTTGCCATAAGCTTAGCATTTGCAAAGGAACCATTCAACGTTAAATCAGGTGCATGCGGCTCCGTCGTTAGAAACGCTGAGATGAAAATCGTCGACACTGAAACTGGTACTTCCCTTCCACCAAACAAACCCGGTGAAATTTGCATTCGAGGCACTAAAGTCATGAAAGGGTACCTGAATGACCGAGAGGCGACGGAGAGAACCATAGACAAAGAAGGATGGTTACACACGGGTGACATTGGTTACATTGATGATGATGATGAGCTATTCATCGTTGATCGCTTGAAGGAGCTTATCAAATACAAAGGATACCAAGTGGCACCTGCTGAGCTGGAATCTTTGTTGATTGCCCACCCAAACATCTCTGATGCCGCTGTTGTACCGCTGAAAGATGAAGTTGCTGGAGAAGTACCAGTTGCATTTGTTGTGAGATCAAATGGTTCTAATATCACCGAGGATGAAATCAAGAAATATATTTCTAAACAGGTGGTATTTTACAAGAGAATAAACAGAGTGTTCTTCACTGAAAGTATTCCAAAAGCAGCGTCAGGAAAAATTCTGAGGAAGGTATTAACAGCAAGGCTTAACGAAGGTTTGGTGACCAATTAG 1761 0.4946 MSYIINSHSTIITIPNQHKQKKPKKKTNTNKTSEMESATAAPTQQEFIFRSKLPDIPIPTHLPLHSYCFQNLPLFHDRPCLIDAETATTLTYADVHLATRRISAGLHSIGIRKGDVIMLVLRNCPEFALAFLGASRCGAPVTTANPFYTPAELAKQATATKTKLIITQSAYVEKFKEYLETNNNDVKIMCIDGSPEESQDTSVLHFSLLTNSNENDEPEVNITTDDLVAIPFSSGTSGLPKGVMLTHSNLVTTVAQLVDGENPHQYTHSEDVLLCVLPMFHIYALNSILLCGIRAGAAVLIVQKFEITTLMELIEKYRVTVASLVPPIVLAVVKSGDTHRYDLSSIRGVISGAAPMGMELQEAVKARLPHAILGQGYGMTEAGPLAISLAFAKEPFNVKSGACGSVVRNAEMKIVDTETGTSLPPNKPGEICIRGTKVMKGYLNDREATERTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKYKGYQVAPAELESLLIAHPNISDAAVVPLKDEVAGEVPVAFVVRSNGSNITEDEIKKYISKQVVFYKRINRVFFTESIPKAASGKILRKVLTARLNEGLVTN* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g3020 586 PANTHER 4-COUMARATE:COA LIGASE-LIKE PROTEIN 43 579 - -
Ahy11g3020 586 Gene3D - 480 583 IPR045851 -
Ahy11g3020 586 ProSitePatterns Putative AMP-binding domain signature. 230 241 IPR020845 -
Ahy11g3020 586 CDD 4CL 58 575 - -
Ahy11g3020 586 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 43 579 - -
Ahy11g3020 586 Pfam AMP-binding enzyme 76 485 IPR000873 -
Ahy11g3020 586 MobiDBLite consensus disorder prediction 1 43 - -
Ahy11g3020 586 SUPERFAMILY Acetyl-CoA synthetase-like 46 581 - -
Ahy11g3020 586 MobiDBLite consensus disorder prediction 1 17 - -
Ahy11g3020 586 Pfam AMP-binding enzyme C-terminal domain 494 569 IPR025110 -
Ahy11g3020 586 Gene3D - 39 479 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g3020 Ahy-Chr11 147857143 147862037 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g3020 46 547 Monolignol Biosynthesis Gene Families AT1G51680 64.822 0.0 646
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g3020 K01904 - gmx:548034 885.945
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g3020 11 147857143 147862037 Ahy1g1953 1 96268283 96272769 hybridization