Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g2999 ATGGGATCCTCCCTGAGTTGCTGTGGCTCTGACAAAATTGAAGAAGCAGCGCAAACAGCATTTGGTGCAGTTAACAACAATTCATGGAGAATATTCACATACAAGGAGCTGCATGCAGCTACAAATGGATTCAGTGAGGACAATAAGCTTGGTGAAGGTGGATTTGGAAGCGTGTATTGGGGAAAAACAAGTGATGGTCATGAGATAGCGGTGAAGAAACTGAAGGCAATGAACTCGAAGGCAGAGATGGAATTTGCTGTAGAAGTAGAAGTACTGGGAAGGGTTAGGCACAAGAATTTGTTGGGACTGAGAGGGTACTGTGCAGGGAATGAAGAAAGGCTTATAGTGTACGATTACATGGCGAATCTGAGCCTTCTTTCTCATCTGCATGGGCAGTTTACAAATGAAGTGCAACTGGATTGGAAAAGGAGAATGAAGATTGCAATTGGATCTGCAGAAGGTGTCTTGTATTTGCACCATGACGTCACACCACACATCATCCACAGAGACATCAAAGCAAGCAACGTTCTTCTCAACTCAGACTTCGAGCCGCTTGTTGCTGACTTCGGCTTCGCTAAGCTGATCCCCGAAGGGGTTAGCCACATGACTACCCGTGTTAAGGGCACTTTGGGATACTTGGCACCCGAATACGCCATGTGGGGAAAAGTCTCCGAGAGTTGCGATGTTTATAGCTTTGGGATTCTTCTGTTGGAGCTTGTAACTGGAAGAAAGCCGATTGAGAAGCTCCCTGGTGGGGTTAAGAGAACCATAACCGAATGGGCTGAGCCATTCATAAGTAAATCAAGGTTCGGGGATCTTGTTGATCCTAAACTCAGAGGTAACTTTGATGAGAATCAGGTGAAGCAAGCGATTCATGTGGCTGCACTTTGCGTGCAGAGTGAGCCTGATAAGAGACCCAACATGAAGCAAGTGGTTAACCTTCTCAAAGGGTATGAACCCAATCATAACGCTGTTTTGAACACTAGGCTTCACACTGTCAAATACACTGATACATTGATGCCACTTGATCAGCATGGTGATGATGATGATGCAACTAATAGCAGCGCCGGCTATGGTGTTTTTAGTGCCATTCAGGTTCAAAAGATGAACTTACCACCATAA 1122 0.4537 MGSSLSCCGSDKIEEAAQTAFGAVNNNSWRIFTYKELHAATNGFSEDNKLGEGGFGSVYWGKTSDGHEIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGNEERLIVYDYMANLSLLSHLHGQFTNEVQLDWKRRMKIAIGSAEGVLYLHHDVTPHIIHRDIKASNVLLNSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLELVTGRKPIEKLPGGVKRTITEWAEPFISKSRFGDLVDPKLRGNFDENQVKQAIHVAALCVQSEPDKRPNMKQVVNLLKGYEPNHNAVLNTRLHTVKYTDTLMPLDQHGDDDDATNSSAGYGVFSAIQVQKMNLPP* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g2999 373 ProSitePatterns Protein kinases ATP-binding region signature. 50 73 IPR017441 GO:0005524
Ahy11g2999 373 SUPERFAMILY Protein kinase-like (PK-like) 28 327 IPR011009 -
Ahy11g2999 373 ProSiteProfiles Protein kinase domain profile. 44 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy11g2999 373 CDD STKc_IRAK 50 317 - -
Ahy11g2999 373 Gene3D Phosphorylase Kinase; domain 1 14 119 - -
Ahy11g2999 373 PANTHER OS01G0750732 PROTEIN 1 370 - -
Ahy11g2999 373 SMART serkin_6 44 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy11g2999 373 PANTHER PTI1-LIKE TYROSINE-PROTEIN KINASE 1 370 - -
Ahy11g2999 373 Gene3D Transferase(Phosphotransferase) domain 1 120 337 - -
Ahy11g2999 373 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
Ahy11g2999 373 Pfam Protein tyrosine and serine/threonine kinase 47 315 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g2999 Ahy-Chr11 147606236 147608093 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g2999 6 334 Trihelix Transcription Factor Family AT5G38560 44.638 3.28e-94 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Ahy11g2999 Pkinase 1.80E-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g2999 - - ahf:112698754 742.651
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2999 11 147606236 147608093 Ahy11g2999 11 147606236 147608093 ECH
Ahy11g2999 11 147606236 147608093 Ahy1g1979 1 96585954 96588027 hybridization