Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g2994 ATGGGAAAGATAAATTACTTTGCCTGCATTATTATTCAATCTTGGTATCTTATGGTCATAATAACAGTTGCTGAGTTTGAAAGTGTTGACTCTTCTGTTCAACCACTACCACTCCTAGGAGGAAAGAAATTGATCATTGGGATACCCTTTAAAACTGGTTTCACTGAATTCGTGGAAGCCAAGCTGGATCCTACAACACTCCAATTGGTCCACGTCAGTGGCTACTCCATTGATATCTTTTCTGCCACGGTTGACTATATCAAACGCTACTCCCATTTCAATGTCTCTTACGATTTTCGACCATTCATCAAAAATGAAACAGGACAAAGTGCTGGCTCTTATGACAAGCTTGTTCAACAGGTTTTTAAACACCAGTATGATGCGGTGGTGGGAGACGTATCAATTGTAGCTGAGAGAACAAGGTATGTGGATTTCACGTTACCATATGCAGAGTCAGGTGTGAGGATGCTGGTGCGAGTTGGATATGGCGGCCGCGGTCTAAACATGTGGATATTTCTGCGGCCATTTAGTTGGGATCTATGGTTGTCCATCATTCTAGTATGTGCTTTTATAGGAGCTGCAATACGATTCATGGAACGTCGTAACATTCATAATAATAATAATAGTCATGAAGAAGAATCTGCACATGGTTCTCCACCTCCCCAACAACTCAAAGGGATATCAATATTATGGCTTCCAATTGATCAACTCTTCCTTCCTCAGAGAGAATCAGTAGGCAAGAATTGCTCCAAGTTTGTATTGGTGGTATGGTTGATATTGGGATTTGTGTTGATGCAAAGCTACACGGCAAACTTGTCATCCATGTTGACCGTGGACCAATTGCAGCAAAGCTATCCAAGTGTTGATGATTTGAGAACAGGTGGTAGCAACATAGGGTACCCAACGGATTCCTATCTATCTGAGGTTCTGGTTGACAAATTCAAGTTCGATAGATCAAGGCTAAAGAATCTGACAAAAATGGAAGATTATCAGAAAGCTTTAGACAAAGGAACTCCAAAAGGCGGCGTTGATGTTATATTTGAGGAGATACCATACATCAAGATGTTCCTCAAAAAATATGGTTCCAAGTATAACATGGTTGGGCCTCACTATCGTACTGATGGGCTTGGCTTTGCGTTTCCAATTAACTCCAACTTAACATCTTACTTTTCAAGAGCTATATTGAACGTTACCCAGAATGACAGTTTTATGCAACCGATTGAGATGAAGTATTTTGGAAGCAGTAACTATGATTTCGAAGATGATTCTTACCAGTTATCAACGTCAACATCATCAGATAGTACTCCTAGCCTTAACTCACAGAGTTTTGCGGGCTTGTTCATCATCACAGGAATTGCCACATTTTTAGCTTTGGTGGTTTCTGAAAGCAACATCTGGAGAAAACCCGTAACACTAGCCAAAGTCTACAGTCAAAAGTTTCTTCTAATGTCTCCTAGTTGGGCAAAATCTAAACAATCTATGGATGTTTCTACAAAGCAAGGGAATAAAATATGTTCTATCAGTGAACCAAATAGCATTCCTGAAAGTCCATCAAGGTTTCCAAAGTCTAATCTTGCTCTAGACACAGTTGTATAG 1596 0.4004 MGKINYFACIIIQSWYLMVIITVAEFESVDSSVQPLPLLGGKKLIIGIPFKTGFTEFVEAKLDPTTLQLVHVSGYSIDIFSATVDYIKRYSHFNVSYDFRPFIKNETGQSAGSYDKLVQQVFKHQYDAVVGDVSIVAERTRYVDFTLPYAESGVRMLVRVGYGGRGLNMWIFLRPFSWDLWLSIILVCAFIGAAIRFMERRNIHNNNNSHEEESAHGSPPPQQLKGISILWLPIDQLFLPQRESVGKNCSKFVLVVWLILGFVLMQSYTANLSSMLTVDQLQQSYPSVDDLRTGGSNIGYPTDSYLSEVLVDKFKFDRSRLKNLTKMEDYQKALDKGTPKGGVDVIFEEIPYIKMFLKKYGSKYNMVGPHYRTDGLGFAFPINSNLTSYFSRAILNVTQNDSFMQPIEMKYFGSSNYDFEDDSYQLSTSTSSDSTPSLNSQSFAGLFIITGIATFLALVVSESNIWRKPVTLAKVYSQKFLLMSPSWAKSKQSMDVSTKQGNKICSISEPNSIPESPSRFPKSNLALDTVV* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g2994 531 Pfam Bacterial extracellular solute-binding proteins, family 3 113 413 IPR001638 -
Ahy11g2994 531 PANTHER RECEPTOR 3.3, PUTATIVE-RELATED 12 487 - -
Ahy11g2994 531 Pfam Ligand-gated ion channel 414 453 IPR001320 GO:0015276|GO:0016020
Ahy11g2994 531 Gene3D - 38 161 - -
Ahy11g2994 531 SUPERFAMILY Periplasmic binding protein-like II 40 414 - -
Ahy11g2994 531 MobiDBLite consensus disorder prediction 508 523 - -
Ahy11g2994 531 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 12 487 - -
Ahy11g2994 531 Gene3D - 167 317 - -
Ahy11g2994 531 MobiDBLite consensus disorder prediction 508 531 - -
Ahy11g2994 531 SMART GluR_14 43 414 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g2994 Ahy-Chr11 147558113 147560495 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g2994 41 460 Ion Channels AT5G11210 35.952 9.81e-76 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g2994 K05387 - aip:107641909 1016.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2994 11 147558113 147560495 Ahy1g1982 1 96642052 96644539 hybridization