Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g2988 ATGCTATCTCGATCTTGCTTAGGGCTATTGAATTTGGTATCGGTGGATGATTACCAGGCACTGAGCCGTGTACCCAGCCTCATGGCGGTTCCGGGAGAACCCACCCGGGACTCATATCAGATCAGCCGTGACGGCCTCTCCAGCGGCGGATCCGACGACGCCGTTTCCCCTCCCCCTCAAGAACGCAGAATCATCGTTGCGAACCAACTCCCTATAAAAGCGACGCGCGATTCAGACACGAAGAAATGGATCTTCGAGTACGACGCCGACAGCCTGTATCTGCAGCTGAAGGATGGGTTCCCCTCCGACGTGGAGGTCCTGTACGTAGGGTCCCTGAAGGCCGACGTGGAGGCTTCCGAGCAGGACGAGGTGTCGCAGGTGCTCCTAGAGCGGTTCCGGTGCGTGCCCACCTTCCTCCCTTGGGAAATTCAGAACAAATTCTACCATGGATTCTGCAAGCACTATCTGTGGCCCCTGTTTCATTACATGCTTCCCATGTCTCCCAGCCACGGCGCCCGCTTCGACCGCGCCCAGTGGCAGGCCTACGTCCTGGCCAACAAGATCTTCGCCGATAAGGTGACGGAGGTCATAAACCCCGACGAGGATTTCGTGTGGGTTCACGATTACCACCTGATGATACTGCCCACTTTCTTGAGGAAAAGGTTCCACCGCGTGAAGCTAGGGTTCTTCTTGCACAGTCCCTTCCCTTCTTCGGAAATCTACAGGACTCTACCTGTTCGTGATGACATACTGAGAGCCTTCTTGAACTGCGACCTGGTTGGTTTCCACACCTTCGATTACGCCAGACACTTCTTGTCCTGCTGCAGCAGGATGCTTGGTTTGGACTACGAGTCTAAAAGAGGTTACATTGGCTTGGATTATTATGGAAGAACCGTCACTATTAAGATTCTCCCCGTTGGGATTCACATGGGGCAGCTTCGCTCCGTGTTGTCTCTGCCGCGCACGGCCAAGAGGGTGGAGGAGTTGAAGGTGGAGTATGAGGGCAAGGTTGTCATTCTTGGCGTCGATGACATGGACTTGTTCAAAGGTATCAGCTTGAAGTTCTTGGCAATGGGGCAGCTTCTTGAGGTGCATGAGGCTCTGAGAGGGAAGGTTGTGTTGGTTCAGATTCTGAACCCCGCCAGGAGCTCAGGGAAGGATATTCAAGACGTCAAGAATGAGTCCGAGGCCCTTGCTAAGGAGATTAACGACAAATATGGTAGGCCGGGTTACCAGCCAATTGTGTTTGTGAATGGTCCAGTTTCAACGGAGGATAAGGCTGCTTACTATGCAATTTCCGAGTGTTGTGTGGTGAATGCGGTGAGGGATGGCATGAACTTGGTGCCTTACACATACACCGTTTGCAGGCAGATAGTTGAGAGTGAGAGGCCTAATCAGAGTGTTATCATTGTATCTGAGTTCATCGGTTGCTCGCCCTCCCTCAGCGGAGCAATCAGGGTCAATCCTTGGAACATTGATGATGTCTCCGAGGCTATGAACTCCGCCATCACAATGCCGGACGGGGAGAAGCATTTGCGCCACGAGAAGCATTACAAGTACATAAGCTCCCATGATGTGGCCTATTGGGCCAGGAGTTTTGATCAGGATTTGGAGAGGGCTTGTAGGGAGCATTACCTCAAGAGGTATTGGGGTGTTGGTTTTGGTCTCGGATTCAGGATCGTTGCTTTGGATCCTACCTTTAGGAAGCTCTCAGTCGATAACATTGTCTCTGCATACAAAGCTACACACAGCCGCTTGATCCTTTTGGACTATGATGGCACTATGTTGCCTCAGGCATCCATAAACAAGACCCCAAGTCCTGAGGTTTTATCTGTATTGAACTATTTATGCAGTGATCCCAAGAATATGGTGTTCATTGTGAGTGGCAGAGACAAGGATTGCCTCGGCAAGTGGTTTGATCCTTGTGACAAGTTGGGCCTCTCAGCAGAACATGGTTACTTCACTAGGTACATTACATTACATTACATTGGACCAATTTGTTTTGTTATTGTTCGTCTAATTTGGTGTGTGTGTGGCAGGTTGAGGAGGGATACTCCTTGGGAGACATGCGGGTTGACAACTGATTTTGACTGGAAGAAGATGGCAGAACCTGTGATGGCGCATTACACAGAGGCAACGGATGGTTCTTTCATTGAACACAAGGAGAGTGCAATGGTTTGGCACCATCAAGAAGCCGATCCTTATTTTGGATCATGCCAAGCCAAAGAGCTTCTTGATCACCTTGAGAATGTGCTGGCCAATGAGCCTGTTGTTGTTAAAAGGGGACAACACATAGTTGAAGTGAAACCTCAGGGTGTGAGCAAGGGTATAGTTGTGGAAAATCTAATCTCAAGCATGAGGAGTGAGGGTAAATCACCAGATTTTCTGTTGTGCATTGGGGATGATCGATCAGATGAAGACATGTTCGAAAGCATTGCTCGTTCAGTTTCTAATCCAGCACTTCCAACAATATCACAAGTGTTTGCATGCACGGTTGGCCAGAAACCAAGCATGGCAAAGTACTATTTGGAGGATACGAGTGAAGTTATCAAGTTGCTACAAGGACTTGCTACTGCATCAGCACCCTCAGCTTTTCAAGAATCGCAACAAGGATCACTATAG 2622 0.4969 MLSRSCLGLLNLVSVDDYQALSRVPSLMAVPGEPTRDSYQISRDGLSSGGSDDAVSPPPQERRIIVANQLPIKATRDSDTKKWIFEYDADSLYLQLKDGFPSDVEVLYVGSLKADVEASEQDEVSQVLLERFRCVPTFLPWEIQNKFYHGFCKHYLWPLFHYMLPMSPSHGARFDRAQWQAYVLANKIFADKVTEVINPDEDFVWVHDYHLMILPTFLRKRFHRVKLGFFLHSPFPSSEIYRTLPVRDDILRAFLNCDLVGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLDYYGRTVTIKILPVGIHMGQLRSVLSLPRTAKRVEELKVEYEGKVVILGVDDMDLFKGISLKFLAMGQLLEVHEALRGKVVLVQILNPARSSGKDIQDVKNESEALAKEINDKYGRPGYQPIVFVNGPVSTEDKAAYYAISECCVVNAVRDGMNLVPYTYTVCRQIVESERPNQSVIIVSEFIGCSPSLSGAIRVNPWNIDDVSEAMNSAITMPDGEKHLRHEKHYKYISSHDVAYWARSFDQDLERACREHYLKRYWGVGFGLGFRIVALDPTFRKLSVDNIVSAYKATHSRLILLDYDGTMLPQASINKTPSPEVLSVLNYLCSDPKNMVFIVSGRDKDCLGKWFDPCDKLGLSAEHGYFTRYITLHYIGPICFVIVRLIWCVCGRLRRDTPWETCGLTTDFDWKKMAEPVMAHYTEATDGSFIEHKESAMVWHHQEADPYFGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVENLISSMRSEGKSPDFLLCIGDDRSDEDMFESIARSVSNPALPTISQVFACTVGQKPSMAKYYLEDTSEVIKLLQGLATASAPSAFQESQQGSL* 874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g2988 873 MobiDBLite consensus disorder prediction 32 58 - -
Ahy11g2988 873 CDD HAD_TPP 586 851 - -
Ahy11g2988 873 Pfam Trehalose-phosphatase 588 847 IPR003337 GO:0003824|GO:0005992
Ahy11g2988 873 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 11-RELATED 1 657 - -
Ahy11g2988 873 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 11-RELATED 680 862 - -
Ahy11g2988 873 CDD GT20_TPS 62 538 IPR001830 GO:0003824|GO:0005992
Ahy11g2988 873 Gene3D Glycogen Phosphorylase B; 316 522 - -
Ahy11g2988 873 Gene3D - 738 870 IPR023214 -
Ahy11g2988 873 Gene3D - 584 661 IPR023214 -
Ahy11g2988 873 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 657 IPR001830 GO:0003824|GO:0005992
Ahy11g2988 873 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 680 862 IPR001830 GO:0003824|GO:0005992
Ahy11g2988 873 Gene3D Glycogen Phosphorylase B; 57 315 - -
Ahy11g2988 873 Pfam Glycosyltransferase family 20 62 538 IPR001830 GO:0003824|GO:0005992
Ahy11g2988 873 TIGRFAM T6PP: trehalose-phosphatase 695 857 IPR003337 GO:0003824|GO:0005992
Ahy11g2988 873 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 62 542 - -
Ahy11g2988 873 Coils Coil 865 873 - -
Ahy11g2988 873 SUPERFAMILY HAD-like 585 857 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g2988 Ahy-Chr11 147446872 147450260 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g2988 10 872 Trehalose Biosynthesis Gene Families AT2G18700 65.789 0.0 1178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g2988 K16055 - gmx:100810498 1431
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2988 11 147446872 147450260 Ahy1g1990 1 96804545 96807915 hybridization