Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g2956 ATGCTTGTGCTTGTGAGCTATGTTGAAATCCGTTGTTGCTCTATAGTCATGGCGCTCTACTCGGTGGTTCTCCTTCTCGTCCTTTTCCTCTCGCGTGCCGCACTCTCTTCATCTGCGGAGCCTCGCAACCACGAAGTGGAGGCTCTAATGAGCATCAAGTGGAGTCTCACTGATCCTCACGGTGTGTTGAGTAACTGGGATGAGTACTCAGTCGACGCTTGCAGCTGGGCCATGATTACTTGCTCCTCTGATTCCCTTGTTATTGGCCTGGGAGCGCCGAGCCAATCTCTCTCTGGAACTTTGTCTGCAGCAATTGGAAACCTAACAAATCTTCGCCAAGTGTTACTGCAGAACAACAATATTTCAGGTCGAATTCCGCCGGAGCTTGGAACCCTTCCAAAGCTTCAGACATTGGATCTTTCCAATAATCGATTCTCTGGGGTGATTCCTTCCTCTCTCGGCCAATTGGATAGTCTCCAATACCTGAGGCTCAACAACAATAGCTTGTCAGGACCCTTTCCTGTTTCACTGGCCAAAATCCCACAGCTTGCTTTCTTGGACTTGTCTTATAACAATCTAAGTGGACCATTGCCCAAGTTTCCAGCAAGGGCATTCAATATTGTGGGAAACCCATTAATTTGTGGAAGCATCACTACTGAAGGTTGCTCTGGATCAGCAACTCTTATGCCCGTTTCCTTCTCTCAAACATCATCACAAGGAAAACACAAGTCCAGAAAAATAGCAGTTGCACTTGGAGTTAGTCTTAGTTGTGCTTCTCTCATGGTTTTGCTCTTTGGGCTCTTTTGGTATAGACATAAACGACAGCACCAGGCCATCCTGTTTATTGGTGAATATAAGGAAGAGGGAATTGTCAGCTTGGGAAATCTCAAGACTTTCACGTTCAGAGAGCTCCAACAGGCAACAGATAGTTTCAGCTCCAAGAACATACTTGGGGCTGGAGGTTTTGGCAACGTTTATAGGGGAAAACTTGGTGACGGCTCTATGGTGGCAGTGAAAAGACTGAAGGATGTTACTGGAAGTTCTGGTGAATCACAGTTTCGAACTGAATTGGAGATGATCAGTTTGGCAGTTCATCGCAATTTACTTCGCTTAATTGGATATTGTGCTACTCCTAATGAAAAGCTTCTGGTTTATCCTTATATGTCCAATGGCAGTGTGGCATCCAGGCTTAGAGGCAAACCATCCTTAGATTGGAACACAAGAAAGAGGATAGCAATTGGAGCTGCGAGAGGACTTCTGTATCTGCACGAGCAATGCGATCCAAAGATAATACACAGAGATGTAAAAGCTGCTAATGTTCTTCTTGATGACTACTGTGAGGCTGTTGTTGGTGATTTTGGCCTTGCAAAGCTCCTTGACCATTCTGAATCCCACGTGACAACTGCGGTCCGTGGCACTGTTGGGCACATTGCTCCAGAGTACCTTTCCACTGGCCAATCTTCTGAGAAAACTGATGTATTTGGTTTTGGCATTCTCTTGCTAGAGCTCATAACTGGAATGACAGCACTTGAGTTTGGGAAAACTGTGAATCAAAAAGGCGCTATGCTAGAGTGGGTTAGGAAAATACAGCAAGAAAAGAAGGTTTCGGTGTTGGTGGACAAGGAGCTAGGGAGCAACTATGACATGATAGAGGTGGGGGAGATGCTTCAAGTGGCTTTACTATGCACTCAATATTTGCCAGCACATCGCCCCAAGATGTCCGAGGTGGTCCGAATGCTTGAAGGCGATGGACTTGCTGAGAAGTGGGCAGCATCACATAGTAATAATCATGATCGGAATGTTAGTCATGGCATGACCCCAAGCAATAACAGTGGCCACACATCATCCCGCGCCCCTGCCCCTGCATCAAAGCATGATGACAGTGTTCATGATCGTACAAGCATGTTTGGCACCACAATGGATGACGATGATGATGAACGCTCCTTGGATTCCTATGCCATGGAACTCTCTGGTCCTAGGTAA 1983 0.4634 MLVLVSYVEIRCCSIVMALYSVVLLLVLFLSRAALSSSAEPRNHEVEALMSIKWSLTDPHGVLSNWDEYSVDACSWAMITCSSDSLVIGLGAPSQSLSGTLSAAIGNLTNLRQVLLQNNNISGRIPPELGTLPKLQTLDLSNNRFSGVIPSSLGQLDSLQYLRLNNNSLSGPFPVSLAKIPQLAFLDLSYNNLSGPLPKFPARAFNIVGNPLICGSITTEGCSGSATLMPVSFSQTSSQGKHKSRKIAVALGVSLSCASLMVLLFGLFWYRHKRQHQAILFIGEYKEEGIVSLGNLKTFTFRELQQATDSFSSKNILGAGGFGNVYRGKLGDGSMVAVKRLKDVTGSSGESQFRTELEMISLAVHRNLLRLIGYCATPNEKLLVYPYMSNGSVASRLRGKPSLDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDYCEAVVGDFGLAKLLDHSESHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMTALEFGKTVNQKGAMLEWVRKIQQEKKVSVLVDKELGSNYDMIEVGEMLQVALLCTQYLPAHRPKMSEVVRMLEGDGLAEKWAASHSNNHDRNVSHGMTPSNNSGHTSSRAPAPASKHDDSVHDRTSMFGTTMDDDDDERSLDSYAMELSGPR* 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g2956 660 Gene3D Phosphorylase Kinase; domain 1 282 387 - -
Ahy11g2956 660 SMART serkin_6 311 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy11g2956 660 SMART LRR_typ_2 108 130 IPR003591 -
Ahy11g2956 660 SMART LRR_typ_2 132 155 IPR003591 -
Ahy11g2956 660 SMART LRR_typ_2 156 187 IPR003591 -
Ahy11g2956 660 Pfam Protein kinase domain 312 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy11g2956 660 MobiDBLite consensus disorder prediction 594 660 - -
Ahy11g2956 660 ProSitePatterns Serine/Threonine protein kinases active-site signature. 430 442 IPR008271 GO:0004672|GO:0006468
Ahy11g2956 660 Pfam Leucine rich repeat 133 193 IPR001611 GO:0005515
Ahy11g2956 660 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 22 660 - -
Ahy11g2956 660 SUPERFAMILY Protein kinase-like (PK-like) 293 581 IPR011009 -
Ahy11g2956 660 Gene3D Transferase(Phosphotransferase) domain 1 388 599 - -
Ahy11g2956 660 SUPERFAMILY L domain-like 42 207 - -
Ahy11g2956 660 Gene3D Ribonuclease Inhibitor 42 224 IPR032675 -
Ahy11g2956 660 ProSiteProfiles Protein kinase domain profile. 311 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy11g2956 660 Pfam Leucine rich repeat N-terminal domain 43 82 IPR013210 -
Ahy11g2956 660 MobiDBLite consensus disorder prediction 595 618 - -
Ahy11g2956 660 ProSitePatterns Protein kinases ATP-binding region signature. 317 339 IPR017441 GO:0005524
Ahy11g2956 660 PRINTS Leucine-rich repeat signature 180 193 - -
Ahy11g2956 660 PRINTS Leucine-rich repeat signature 135 148 - -
Ahy11g2956 660 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 22 660 - -
Ahy11g2956 660 MobiDBLite consensus disorder prediction 623 642 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g2956 Ahy-Chr11 147161756 147166774 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g2956 15 660 Receptor kinase-like Gene Family AT5G16000 62.957 0.0 790
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Ahy11g2956 Pkinase 1.80E-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g2956 - - gmx:100797186 1057.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2956 11 147161756 147166774 Ahy11g2956 11 147161756 147166774 ECH
Ahy11g2956 11 147161756 147166774 Ahy1g2018 1 97104744 97109787 hybridization