Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g2929 ATGCCAACCCGATGTGAAATTTGCTGCGAGATTTTGATCGCCATCTTGCTCCCCCCACTCGGTGTTTGCTTCCGCCATGGTTGCTGCAGTGTTGAATTCCTCATCTGCTTGCTGTTGACTATTCTAGGGTATATCCCTGGGATAATTTATGCACTTTATAGCATTATCTTTGTTGATCGTGATCAGTACTTCGATGAGTATAGGCGCCCTCTCTATGCACAATCTAGCACCAATTAA 237 0.4473 MPTRCEICCEILIAILLPPLGVCFRHGCCSVEFLICLLLTILGYIPGIIYALYSIIFVDRDQYFDEYRRPLYAQSSTN* 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g2929 78 PANTHER HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED 1 73 IPR000612 GO:0016021
Ahy11g2929 78 PANTHER BNAA03G50460D PROTEIN 1 73 - -
Ahy11g2929 78 ProSitePatterns Uncharacterized protein family UPF0057 signature. 12 27 IPR000612 GO:0016021
Ahy11g2929 78 Pfam Proteolipid membrane potential modulator 8 55 IPR000612 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g2929 Ahy-Chr11 146889688 146890505 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g2929 1 75 RCI2 Gene Family AT4G28088 77.632 1.41e-40 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g2929 - - gmx:100306426 135.576
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2929 11 146889688 146890505 Ahy11g2929 11 146889688 146890505 ECH