Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g2922 ATGGACTTCAACCACCGAGCTATTGGGGTTACGCCACCGACGCAGTCCTTATACACGGCCTTCCCTCCTCCCCCTCCTTCTCCCGCCACCGCCGTCTACTCCGACCGATTGTTGCGAGGTGAGTTTCTAAACATGGTTTCAATGCCGCTGACCAATGCGGTTGCCGGAGACTCCATGCGGGAACTGGAGAAGGCGCAGATACGGCGAGAGATGATTGCCAGCGGCGTTGCACGGAGGATTCAGCTTGAAGCTGAGGTGAGGAGGGAGCTCGCCTTGGAAGCATTGTTGGGAATTCTTCCAATGCAGAGAGGAAATCTGAGTGAATCAGTGCAGCTTCAGCCACCGCCACCGCCACCGCCACCGCCACCGCCACCGCGTCGATCCTTGGTTGAGGAGAGAGTGGCAATGAGTTTAAATAACCGTTTCAATAGTACATTTGCCCCACCAAAATCACAACAGTTGCAGCAACTCATGGCTCCTGTGAAGATAGAGCCTTGTCCTGAAGAGACTAGCAAGAAGGATAAAGTGATCATACTGGACAAGCCAAACCCAGCTCTCCATTCCAGAAAGCAGAAAGCTGTAATACCCCCGCTTGATGAGCATCGTAAACCCAAGGAAGTGTGGAGTTGTGCGCTATGTCGGGTTAGTGCTCCAAATCAGGGAGTCTTTAGTGCACATGTTCAGGGTAGGAAGCACAAGGCCAAGGAAGCATCATTGAGACAACAGAACAATAGTAAGAGCACCGACATGTCCGCGTCGTCAAAGAGAAGAAAGTTTAATGAGTTTACTGCATCCATTGCTGCCACAATATCAAGGTCAAACGCAGAAGCAGATCAGCAGGTGAAGAATCTAAATATGGTTGATACAGCTAGAGTAGAATCTAAAGAAGAGGAGCAGCCTGAGCAGAACAGGCAAAATATAGAACCTCTGAAGAACAAGAATGGTACAACAACCACCATTGGTGACCAAGCGGAGAGAATAAATGCATTAAAGAAAATACACGCGAAATTTTGGTGTGAAACGTGTCAGGTTGGAGTTTGGGCAGAAGCTGTGATGGAAGACCACTTGAAAGGGAAAAAGCACCTGAACCAGATGAAGAGACTTGGTGCAAACCATTCGAGTTCCGCATCTTCCAACATCACAAGAAGCTCCTGTAAGTTTGATCAAAAGATAACAACAGAATAG 1185 0.4878 MDFNHRAIGVTPPTQSLYTAFPPPPPSPATAVYSDRLLRGEFLNMVSMPLTNAVAGDSMRELEKAQIRREMIASGVARRIQLEAEVRRELALEALLGILPMQRGNLSESVQLQPPPPPPPPPPPPRRSLVEERVAMSLNNRFNSTFAPPKSQQLQQLMAPVKIEPCPEETSKKDKVIILDKPNPALHSRKQKAVIPPLDEHRKPKEVWSCALCRVSAPNQGVFSAHVQGRKHKAKEASLRQQNNSKSTDMSASSKRRKFNEFTASIAATISRSNAEADQQVKNLNMVDTARVESKEEEQPEQNRQNIEPLKNKNGTTTTIGDQAERINALKKIHAKFWCETCQVGVWAEAVMEDHLKGKKHLNQMKRLGANHSSSASSNITRSSCKFDQKITTE* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g2922 394 MobiDBLite consensus disorder prediction 290 304 - -
Ahy11g2922 394 SMART ZnF_U1_5 334 368 IPR003604 GO:0003676|GO:0008270
Ahy11g2922 394 SMART ZnF_U1_5 205 239 IPR003604 GO:0003676|GO:0008270
Ahy11g2922 394 Gene3D Classic Zinc Finger 326 373 - -
Ahy11g2922 394 Gene3D Classic Zinc Finger 199 245 - -
Ahy11g2922 394 PANTHER OS06G0651300 PROTEIN-RELATED 1 379 - -
Ahy11g2922 394 SUPERFAMILY beta-beta-alpha zinc fingers 321 368 IPR036236 -
Ahy11g2922 394 MobiDBLite consensus disorder prediction 370 394 - -
Ahy11g2922 394 MobiDBLite consensus disorder prediction 290 318 - -
Ahy11g2922 394 SUPERFAMILY beta-beta-alpha zinc fingers 192 243 IPR036236 -
Ahy11g2922 394 PANTHER OS06G0651300 PROTEIN 1 379 - -
Ahy11g2922 394 MobiDBLite consensus disorder prediction 229 256 - -
Ahy11g2922 394 SUPERFAMILY Formin homology 2 domain (FH2 domain) 114 180 - -
Ahy11g2922 394 Pfam Zinc-finger of C2H2 type 337 361 - -
Ahy11g2922 394 Pfam Zinc-finger of C2H2 type 208 232 - -
Ahy11g2922 394 MobiDBLite consensus disorder prediction 111 128 - -
Ahy11g2922 394 MobiDBLite consensus disorder prediction 108 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g2922 Ahy-Chr11 146838885 146841277 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g2922 210 366 C2H2 Transcription Factor Family AT5G61190 26.875 3.71e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g2922 - - adu:107459277 665.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2922 11 146838885 146841277 Ahy11g2922 11 146838885 146841277 ECH
Ahy11g2922 11 146838885 146841277 Ahy1g2044 1 97409745 97412038 hybridization