Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ahy11g2868 | ATGCCGGACGGAGAATCCTCTTCCGCCACGTCATCGGCGGAGCTGGAGCCCCATTTAAGCGTCGCTGAATACTTGCTGCAGAACCTTAGTCTCTCTGAAGTCAAAGATCATGACGACCAAGCTGTTAAGAAAGACCCCAAAAAAATTGCCAGAAGGTACCAGTTGGAGCTGTGCAAAAAAGCATTAGAAGAAAATATAATTGTATATTTGGGGACAGGTTGTGGGAAGACCCACATTGCTGTGCTGCTTATGCATGCGATGGGTCATTTGATAAGGAAGCCCCAGAAAAATATATGTATTTTTCTTGCCCCTACTGTGGCGCTTGTTCATCAGCAAGGGAAGGTTATAGAAGACTCTACTGATTTTAAGGTTGGGATTTTCTGTGGGAGCTCCAAGCGCTTGAAACGTCATCATGATTGGGAGCAGGAAATTGGACAGCATGAGGTTCTTGTCATGACCCCGCAGATATTATTGCACAACTTATCTCATTGTTTCATTAGGATGGACATGATTTCACTTTTGATATTTGATGAATGTCATCATGCTCAAGTCAAAAGCAACCATCCTTATGCAGAAATCATGAAAGTCTTCTACAAAAATAATTCCAAAAGTGTTCCCCGTATTTTTGGCATGACTGCTTCCCCAGTCGTAGGAAAAGGGGCTTCCAGTGAAGCAAATCTATCAAAAAGCATCAATAGTCTTGAACAAATACTTGATGCTAAGGTATACACAGTTGAAGACAGGGAATTGCAATCTTTTGTGACCAATGCAACAATTTCTGTATATCATTATAGCTCAGTTGCAAATGGAACAGATAGCTTGTATACAACTTACCATGCAGATCTTGATCTGATCAAATATCAGTGCATAGCAAGCCTCGGTAGGAATGTAGAAGATCACCAGAAACGGATGAACACAAAAAAACTTCTAAACAGGATACATGAGAATGTTGTTTTCTGTCTGAGGAATCTTGGCATTTGGGGAGGACTGCAAGCTAGTCATATTCTTTTGAGGGGCGATCGTTCCGAGAGGCATGAATTAGTGGAGGCAGAAGGAAATTCAAGTGATGACTCTGTGTGTGATAAATATCTATCTCAGGCAGCTGAACTCTTTAACTCACATCTGAAAGGTGACGGTGTATCTGATTTATCTTCTATGGAAATAATGAGAGAGCCCTTTTTCTCATCAAAACTTTTGTGCCTCGTTCAGATACTGTCCTCCTTTAGGATGCAACAGAACCCAAAATGTATCATTTTTGTTAATAGAATCGTGACTGCAAGATCCCTGTCATACATACTTAAGAAGCTGAAACTTCTAACACAATGGAGGAGTGATTTTCTAGTAGGAGTCCATGCTGGATTGAAGAGTATGTCACGCAAGACCATGAACATCATTGTTGAGAAGTTTCGCTCTGGTGAGTTGAATCTATTGGTTGCAACAAAAGTGGGTGAAGAAGGACTTGACATTCAAACTTGCTGCCTTGTGATACGGTTTGATCTTCCTGAAACTGTTGCCAGCTTTATACAGTCAAGAGGCCGTGCACGTATGCCTCAGTCAGAATATGCATTTTTGGTGGACAGTGACAATAAGAAGGATCTCGATTTAATTGATGGTTTTGAGAAAGATGAATGCCGCATGAATATGGAAATTGCTGACCGTACATCAACTGAGACATACATAATCCCTGAGGAAAGAATATTCAGAGTAGATTCATCCGGTGCTTCTGTCAGTTCTGGATATAGTATTTCATTACTTCACCAGTATTGTTCAAAGCTTCCACATGATGAGTACTTTGACCCCAAGCCAAGCTTTTATTACTTTGATGAAAAAGATGGGATAGTCTGCCACATAATATTTCCATCCAATGCACCAATACACTTAATTGTCAGTTCACCACAGTTGTCTATGGAAGCTTCCAAAAAGGATGCTTGCCTGAAAGCAATTCAAGAACTGTATGAAATAGGTTCATTAAGTGATTGTCTTTTGCCAAAGCAAGAGACCACAGAGCCAGAGGAGAAGGATTCAAGCCCATCTAATACAGATGGTTGTGAAGAGGACAATTCAAGAGGAGAATTACATCAGATGTTAGTTCCTTCTCCCTTTAGAAAGTCTTGGATAAATGAAGAGAAAATTGTTCATCTCAACTCATACTACATAAAATTTTGCCCCTCTCCAGAGGATAGGGTTTACAAAAAGTTTGGTCTATTCATCATGACATGTCTTCCAGCAGAGGCTGAGAAACTGGAACTTGATCTTCATCTTGCTCATGGTAGATCTGTTATGACATCATTTGTTCCATTTGGAGTTGTAGAATTCGACAAAGATGAGATTAAGATGGCTGAACGTTTTCAAGAGATGTTCCTTAAAATTATTCTTGACCGATCAGAATTTGTTTCTGATCTTGTAACCCTGGGTAAAGGTGCTGAATCTCACAATGGTTCATCAACCTTCTACCTTATGCTTCCAGTTGTATTGCAAGAATATGAAAATATCATGACTGTGGATTGGAAGACTGTGAGAAGATGCCTTTGTTCACCAATTTTCAAGCCTCCACCAGATGCTGTGTACCAAAAGCCTTATCCTTCTGATTCATCACTTCAACTTGCCAATGGTAAAAGAAGCATAAGAGATGTTGAAAATAGTTTGGTATATGCCAAACACAAAAAGCTCTTCTATTTTGTCACAAACGTGAACCGTGAAAAGAATGGATTAAGTCCCAGTAAAGATTCAGGCACTTCAAGCTATGCAGATGACTTACTTGAAAAGTTTAGTATTCATCTCAAACACCCTGAACAGCGACTTCTGCATGCAAAACCAGTTTTCAATCTGCACAACCTGCTGCATAATCGGAAGTATGAGGATACAGAGCCACAGGAGCTGGAGGAGTTCTTTGTTGATTTGCCTCCTGAGCTTTGCGAATTGAAAGTTGTGGGTTTTTCGAAGGATATGGGTAGTTCCATATCTTTGCTACCCTCAGTTATGCATCGTCTTGGAAACTTACTGGTTGCTATTGAACTCAAGCAAATGCTGTCTCGATTCTTCCCAGAGGCAGCTGAAATTAATTCCCATACAATTCTTGAAGCTCTCACAACTGAGAAGTGTCAGGAACGGTTTTCGCTTGAAAGACTAGAAGTGCTTGGAGATGCTTTTCTCAAATTTGCTGTTGCACGCCATTTTTTTCTCACATGTGACAGTCTTCATGAAGGAGACCTTACTGCAAGGCGTTCTAATGTTGTAAATAATTCCAATTTGTATAAATTGGCTCTTAAACGCAATTTGCAGGTCTATATACGTGATCAGGCGTTTGATCCCTGTCAATTCTACGCATTTGGCCGTCCTTGCCCAATAGTTTGCAACAATGAAACAGAAGAAAGTATACACTCATGTTTAAATTCTGTTAAGGAGCAAGGAAGCTCAACTGAAATCCAGTGCAATAAAAATCACCACTGGGTATATAGAAAAACAATTGCTGATGCAGTTGAAGCTTTGGTCGGAGCATTTATAGTTGACAGTGGCTTTAAAGCTGCAATTGCATTTCTTACGTGGCTTGGCATACAAGTTAGTTTTGAAGCCTCACAATTGATTAATGTTTGCCGAGGAAGTGTTGGCTATGTTCCTCTCTCTGCTGATGTAAACATTCTTTCCCTCGAAGATAAGTTGGGATATCACTTCATTCATAAGGGTCTGCTTCTTCAGGCTTTTGTGCATCCTTCTTACAATAAGCATGGAGGAGGTTGCTACCAGCGACTGGAGTTTCTTGGTGATGCTGTGCTGGATTTTTTGATTACTTCATACCTGTACTCAGCTTATCCCAAGCTAAAGCCTGGTCAATTGACGGATTTGAGATCGTTGTCTGTTAACAATAAGGCATTTGCCTGTGTTGCTGTGGATCGCAGTTTTGATAAATTTCTTTTATGTGATTCTAGCAACCTTTCTGAGGCAGTAAAAAAGTATGTGGCCTATATTAGAAGACCTTCATCAAGTAATGTCAATGAAGGGCCGAAATGTCCAAAGGCTTTGGGTGACTTGGTGGAATCTTGTGTTGGTGCTATTCTTCTTGATTCAGGGTTCAATTTGTACAAAGTTTGGGAAATAATGACTTCATTCTTGGATCCAATCATGAAATTCTCATCTAACCTGCAGCTTAGTCCCAAGAGGGATCTGCAAGAACTATGCCAATCTCATAATTTGGAGTTGCAACTCCAAGCATCAAAGTTGACTAAAATGTTTTCAGTTGAAGCAAAAGTGATTGTGAATGGTACATGTCAAACAGCAGTGGCAACCGGGCAAAGTAAAAAAGAGGCTACTAGAATTGCTTCACAGAAACTATTTTCAGAGCTAAAGGCTCAAGGCTGGAGACCAAGGTCAAAACCTTTGGAAGAAGTTTTAAAATCTACCTTTAAGGGGGAAGCAAAACTTATTGGCTATAATGAAACTCCCATTGATGTAACAGCAATTAATTCCATTGAGCACTCGACGGTTAATGGGAACTTAAGTAGCAGCAACTCAAACCCGATAATTCGCCCCCTCCGTGAGGTGATTGGTATAAAACCTGTTGACCAAAAGGTTCAACATTCTTCTAAGGGACAGCGTAGTGGAACTTATGATAATCGTGATTGTGCCGGTGATTTATCAAGGACAGGAACTGCAAGGTCACGATTGTATGAATTCTGTGCTGCTTCTTGCTGGAAACCACCGACATTTGAGTGCGTCTATGAAGGGGGACCAGATCACATGAAGTTATTCACATACAAGGTGACCTTGGACATAGAAGAATCCCCAGATGTGATTTATGAATTCATTGGGGAACCAAAACCGAAGAAGAAAGACGCAGCAGAGTCCACGGCTGAGGGTGTGTTTTGGTACCTGGAACGCGCAGGTTACCTGCCTAATAAGCGTAACTAA | 4905 | 0.4059 | MPDGESSSATSSAELEPHLSVAEYLLQNLSLSEVKDHDDQAVKKDPKKIARRYQLELCKKALEENIIVYLGTGCGKTHIAVLLMHAMGHLIRKPQKNICIFLAPTVALVHQQGKVIEDSTDFKVGIFCGSSKRLKRHHDWEQEIGQHEVLVMTPQILLHNLSHCFIRMDMISLLIFDECHHAQVKSNHPYAEIMKVFYKNNSKSVPRIFGMTASPVVGKGASSEANLSKSINSLEQILDAKVYTVEDRELQSFVTNATISVYHYSSVANGTDSLYTTYHADLDLIKYQCIASLGRNVEDHQKRMNTKKLLNRIHENVVFCLRNLGIWGGLQASHILLRGDRSERHELVEAEGNSSDDSVCDKYLSQAAELFNSHLKGDGVSDLSSMEIMREPFFSSKLLCLVQILSSFRMQQNPKCIIFVNRIVTARSLSYILKKLKLLTQWRSDFLVGVHAGLKSMSRKTMNIIVEKFRSGELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSDNKKDLDLIDGFEKDECRMNMEIADRTSTETYIIPEERIFRVDSSGASVSSGYSISLLHQYCSKLPHDEYFDPKPSFYYFDEKDGIVCHIIFPSNAPIHLIVSSPQLSMEASKKDACLKAIQELYEIGSLSDCLLPKQETTEPEEKDSSPSNTDGCEEDNSRGELHQMLVPSPFRKSWINEEKIVHLNSYYIKFCPSPEDRVYKKFGLFIMTCLPAEAEKLELDLHLAHGRSVMTSFVPFGVVEFDKDEIKMAERFQEMFLKIILDRSEFVSDLVTLGKGAESHNGSSTFYLMLPVVLQEYENIMTVDWKTVRRCLCSPIFKPPPDAVYQKPYPSDSSLQLANGKRSIRDVENSLVYAKHKKLFYFVTNVNREKNGLSPSKDSGTSSYADDLLEKFSIHLKHPEQRLLHAKPVFNLHNLLHNRKYEDTEPQELEEFFVDLPPELCELKVVGFSKDMGSSISLLPSVMHRLGNLLVAIELKQMLSRFFPEAAEINSHTILEALTTEKCQERFSLERLEVLGDAFLKFAVARHFFLTCDSLHEGDLTARRSNVVNNSNLYKLALKRNLQVYIRDQAFDPCQFYAFGRPCPIVCNNETEESIHSCLNSVKEQGSSTEIQCNKNHHWVYRKTIADAVEALVGAFIVDSGFKAAIAFLTWLGIQVSFEASQLINVCRGSVGYVPLSADVNILSLEDKLGYHFIHKGLLLQAFVHPSYNKHGGGCYQRLEFLGDAVLDFLITSYLYSAYPKLKPGQLTDLRSLSVNNKAFACVAVDRSFDKFLLCDSSNLSEAVKKYVAYIRRPSSSNVNEGPKCPKALGDLVESCVGAILLDSGFNLYKVWEIMTSFLDPIMKFSSNLQLSPKRDLQELCQSHNLELQLQASKLTKMFSVEAKVIVNGTCQTAVATGQSKKEATRIASQKLFSELKAQGWRPRSKPLEEVLKSTFKGEAKLIGYNETPIDVTAINSIEHSTVNGNLSSSNSNPIIRPLREVIGIKPVDQKVQHSSKGQRSGTYDNRDCAGDLSRTGTARSRLYEFCAASCWKPPTFECVYEGGPDHMKLFTYKVTLDIEESPDVIYEFIGEPKPKKKDAAESTAEGVFWYLERAGYLPNKRN* | 1635 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ahy11g2868 | 1634 | Pfam | Type III restriction enzyme, res subunit | 57 | 215 | IPR006935 | GO:0003677|GO:0005524|GO:0016787 | |
Ahy11g2868 | 1634 | CDD | DSRM_DCL_plant | 1556 | 1625 | - | - | |
Ahy11g2868 | 1634 | SUPERFAMILY | RNase III domain-like | 1211 | 1374 | IPR036389 | GO:0004525|GO:0006396 | |
Ahy11g2868 | 1634 | Gene3D | paz domain | 863 | 974 | - | - | |
Ahy11g2868 | 1634 | ProSiteProfiles | Dicer double-stranded RNA-binding fold domain profile. | 581 | 671 | IPR005034 | GO:0016891 | |
Ahy11g2868 | 1634 | Pfam | Dicer dimerisation domain | 581 | 667 | - | - | |
Ahy11g2868 | 1634 | PANTHER | DICER-RELATED | 46 | 1626 | - | - | |
Ahy11g2868 | 1634 | ProSitePatterns | Ribonuclease III family signature. | 1248 | 1256 | IPR000999 | GO:0004525|GO:0006396 | |
Ahy11g2868 | 1634 | MobiDBLite | consensus disorder prediction | 665 | 689 | - | - | |
Ahy11g2868 | 1634 | SMART | PAZ_2_a_3 | 853 | 1002 | IPR003100 | GO:0005515 | |
Ahy11g2868 | 1634 | SMART | riboneu5 | 1023 | 1193 | IPR000999 | GO:0004525|GO:0006396 | |
Ahy11g2868 | 1634 | SMART | riboneu5 | 1228 | 1379 | IPR000999 | GO:0004525|GO:0006396 | |
Ahy11g2868 | 1634 | MobiDBLite | consensus disorder prediction | 1521 | 1542 | - | - | |
Ahy11g2868 | 1634 | ProSiteProfiles | PAZ domain profile. | 876 | 976 | IPR003100 | GO:0005515 | |
Ahy11g2868 | 1634 | ProSiteProfiles | Double stranded RNA-binding domain (dsRBD) profile. | 1383 | 1449 | IPR014720 | - | |
Ahy11g2868 | 1634 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 400 | 554 | IPR001650 | - | |
Ahy11g2868 | 1634 | SUPERFAMILY | dsRNA-binding domain-like | 1547 | 1623 | - | - | |
Ahy11g2868 | 1634 | PANTHER | DICER-LIKE PROTEIN 4 | 46 | 1626 | - | - | |
Ahy11g2868 | 1634 | Pfam | Ribonuclease III domain | 1041 | 1172 | IPR000999 | GO:0004525|GO:0006396 | |
Ahy11g2868 | 1634 | Pfam | Ribonuclease III domain | 1248 | 1356 | IPR000999 | GO:0004525|GO:0006396 | |
Ahy11g2868 | 1634 | Pfam | PAZ domain | 876 | 997 | IPR003100 | GO:0005515 | |
Ahy11g2868 | 1634 | Pfam | double strand RNA binding domain from DEAD END PROTEIN 1 | 1550 | 1624 | - | - | |
Ahy11g2868 | 1634 | Gene3D | Ribonuclease III domain | 1018 | 1183 | IPR036389 | GO:0004525|GO:0006396 | |
Ahy11g2868 | 1634 | CDD | RIBOc | 1025 | 1183 | IPR000999 | GO:0004525|GO:0006396 | |
Ahy11g2868 | 1634 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 98 | 530 | IPR027417 | - | |
Ahy11g2868 | 1634 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 57 | 233 | IPR014001 | - | |
Ahy11g2868 | 1634 | SMART | DRBM_3 | 1550 | 1624 | IPR014720 | - | |
Ahy11g2868 | 1634 | SMART | DRBM_3 | 1384 | 1448 | IPR014720 | - | |
Ahy11g2868 | 1634 | ProSiteProfiles | Ribonuclease III family domain profile. | 990 | 1172 | IPR000999 | GO:0004525|GO:0006396 | |
Ahy11g2868 | 1634 | Gene3D | - | 1556 | 1625 | - | - | |
Ahy11g2868 | 1634 | SUPERFAMILY | dsRNA-binding domain-like | 1338 | 1448 | - | - | |
Ahy11g2868 | 1634 | CDD | DEXHc_dicer | 48 | 247 | - | - | |
Ahy11g2868 | 1634 | SUPERFAMILY | RNase III domain-like | 1021 | 1187 | IPR036389 | GO:0004525|GO:0006396 | |
Ahy11g2868 | 1634 | SMART | ultradead3 | 46 | 251 | IPR014001 | - | |
Ahy11g2868 | 1634 | Gene3D | - | 1384 | 1453 | - | - | |
Ahy11g2868 | 1634 | Hamap | Ribonuclease 3 [rnc]. | 1216 | 1444 | IPR011907 | GO:0003723|GO:0004525|GO:0006364 | |
Ahy11g2868 | 1634 | Gene3D | Dicer dimerisation domain | 577 | 674 | IPR038248 | - | |
Ahy11g2868 | 1634 | Gene3D | - | 50 | 286 | IPR027417 | - | |
Ahy11g2868 | 1634 | Gene3D | - | 389 | 551 | IPR027417 | - | |
Ahy11g2868 | 1634 | CDD | RIBOc | 1229 | 1378 | IPR000999 | GO:0004525|GO:0006396 | |
Ahy11g2868 | 1634 | Pfam | Helicase conserved C-terminal domain | 397 | 515 | IPR001650 | - | |
Ahy11g2868 | 1634 | Gene3D | Ribonuclease III domain | 1211 | 1383 | IPR036389 | GO:0004525|GO:0006396 | |
Ahy11g2868 | 1634 | ProSiteProfiles | Ribonuclease III family domain profile. | 1213 | 1356 | IPR000999 | GO:0004525|GO:0006396 | |
Ahy11g2868 | 1634 | SMART | helicmild6 | 427 | 517 | IPR001650 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ahy11g2868 | Ahy-Chr11 | 146327326 | 146345994 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ahy11g2868 | 415 | 552 | Eukaryotic Initiation Factors Gene Family | AT3G19760 | 31.206 | 1.57e-07 | 53.9 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ahy11g2868 | K11592 | - | gmx:100818702 | 2503.4 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Ahy11g2868 | 11 | 146327326 | 146345994 | Ahy11g2868 | 11 | 146327326 | 146345994 | ECH |