Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g2861 ATGCTTCCTTCCATAACCCCCCGAACCATCATCATTTCAGACGCTCCACTCGCCATTCCTCTCAAACTTGTATTACTTGGAACAATGTCACTGACTAGTAAACCCCCTCCTAAAATCAGAATTGAAGGAGAGCATTGCCCTGGTGCGGTGGTGGAATGGTACCAACGTTCTGCATCAAAGGATCAAAGACACGATTTTGACCTGAGCTTGAAGGCGAAGAAACACCTCGTTTCGTTGGGTTGGACCTTTTCTTATTGCGACAAGAAAACTCGCTGGGAACTTCGTTACAAATCCCCTTCTGGATCACAGCAATCTCAATCCAAGGTAACCGGTGGTAGGCCTCGGAGACGCAAGAAACCGAGTGACGATGAAGATTGGACTCTTCCGGAGACGCAAGTATCCAATTTAGTAAGTCCTCGTTCTGGTGAAAGTCCTGATGCCGCAAGAAAAGTAAGGAGACGGAGTTCTTCTGATAATCGGAATCCAAGAACGATTCTTTCTTGGCTGATGGACAACAATGTGGTGGCGCAGGAGGCGTGGGTTTTCTGCCGTGGAGAATTGGTGAAGAGAGGGAAGCTGTTTCGTTCTGGTATTTTCTGCCATTGTTGTGATTCTTTATGGACACTCTCTCAATTCCAGGCTCATGCCGGTTGCAAAGGTCAACCTCCCTCTGCTAGTATCTTCTTGGAACAAGATAAAAGGTCTTTGCTGGATTGCCAGAAACAAGCATTGATGATGATCAAGGCTAACAACAATGGGGATAATGATCATCATCATGAAAATGATTCCATTTGTTCAATTTGTCTCCAGGGGGGTTTCATTCTTCTCTGTGATCACTGTCCGGCGTCATTCCACGCCGAATGTATTGGCCTTGATCATGTTCCCCCTGGTGATTGGTTCTGCCCTTCATGCTCTTGCAGACTTTGCAACCGTCCCAAATGCAGAGAGGAAAGTCATTTGGCTAACAATTTTATAGCTTGTTATCAGTGTCAACGCAGATTCCACATTGGATGTTTAGCTTCTAGAGGCTTTGCTTTTCTGAACATGGAAACCGATTGGTTTTGCAATGAAGATTGTCACAAGATATTTTTGACACTGAATAACATGTTGGGAAAACCAATTCCTGTGGGTGATGGTAATCTAACTTGGACATTGTTGACGAGCCTCAAGAAAAGCACTAATGACAATGATGACGATGGAACCATTACTGAAATGGAGAGCAAGCTAAATGTCGCACTTGGAATAATTCATGAGTGTTTTGTGCCCATCATAGATCCTGTATTTGGAAGAGACATTGCTGCAGATATTATGTTCAGCAGATATTCACGGCTGCCACGTATGAACTTTACAGGGTTCTACACTGTGATTCTAGAGAGGAATGATGAGGTGTTCTCTGTTGCAAACACAAGGATTTATGGCCAAAAGCTTGCAGAAGTGCCGCTTGTCGCGACGAGGGACCAGTATCGAAACCGGGGAATGTGTCGAATTCTGATGGATCAGCTTGAGAAGCTGTTGGTTAAGTTGGGTGTTGAGAGGTTGCTATTGCCTGCCGCTCCTTATTTAGTAGAAACTTGGACAAACTCATTTGGATTTGCAAAAATGACACACTCAGATCAGTATTACTGTGTAGGTTATCCTCTTGCAAATTTTCCAGACACAACATTGTGCCACAAATCATTGAAGCAACCTTTGATGCTGTATTGA 1704 0.4419 MLPSITPRTIIISDAPLAIPLKLVLLGTMSLTSKPPPKIRIEGEHCPGAVVEWYQRSASKDQRHDFDLSLKAKKHLVSLGWTFSYCDKKTRWELRYKSPSGSQQSQSKVTGGRPRRRKKPSDDEDWTLPETQVSNLVSPRSGESPDAARKVRRRSSSDNRNPRTILSWLMDNNVVAQEAWVFCRGELVKRGKLFRSGIFCHCCDSLWTLSQFQAHAGCKGQPPSASIFLEQDKRSLLDCQKQALMMIKANNNGDNDHHHENDSICSICLQGGFILLCDHCPASFHAECIGLDHVPPGDWFCPSCSCRLCNRPKCREESHLANNFIACYQCQRRFHIGCLASRGFAFLNMETDWFCNEDCHKIFLTLNNMLGKPIPVGDGNLTWTLLTSLKKSTNDNDDDGTITEMESKLNVALGIIHECFVPIIDPVFGRDIAADIMFSRYSRLPRMNFTGFYTVILERNDEVFSVANTRIYGQKLAEVPLVATRDQYRNRGMCRILMDQLEKLLVKLGVERLLLPAAPYLVETWTNSFGFAKMTHSDQYYCVGYPLANFPDTTLCHKSLKQPLMLY* 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g2861 567 MobiDBLite consensus disorder prediction 145 159 - -
Ahy11g2861 567 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 400 552 IPR000182 GO:0016407
Ahy11g2861 567 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 37 563 - -
Ahy11g2861 567 Pfam PHD-finger 264 306 IPR019787 -
Ahy11g2861 567 SMART PHD_3 306 359 IPR001965 -
Ahy11g2861 567 SMART PHD_3 264 305 IPR001965 -
Ahy11g2861 567 MobiDBLite consensus disorder prediction 96 110 - -
Ahy11g2861 567 Gene3D - 423 547 - -
Ahy11g2861 567 MobiDBLite consensus disorder prediction 96 162 - -
Ahy11g2861 567 ProSiteProfiles Zinc finger PHD-type profile. 262 307 IPR019787 -
Ahy11g2861 567 MobiDBLite consensus disorder prediction 127 141 - -
Ahy11g2861 567 Pfam Tify domain binding domain 191 243 IPR032308 -
Ahy11g2861 567 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 239 306 IPR013083 -
Ahy11g2861 567 CDD NAT_SF 455 515 - -
Ahy11g2861 567 PANTHER DUF724 DOMAIN-CONTAINING PROTEIN 4-RELATED 37 563 - -
Ahy11g2861 567 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 307 362 IPR013083 -
Ahy11g2861 567 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 445 548 IPR016181 -
Ahy11g2861 567 SUPERFAMILY FYVE/PHD zinc finger 241 306 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g2861 Ahy-Chr11 146256892 146261207 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g2861 133 505 PHD Transcription Factor Family AT5G58610 42.494 7.53e-91 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Ahy11g2861 TDBD 2.00E-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g2861 - - aip:107608518 931.398