Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g2859 ATGGATGGATCGTTTGTGCCTAGAAACAACATTGAAGAGGCTATACTTCTTTTAATGATTTTGCTAAGAAAAGTCACTCTAAATAGAATTGAGTGGGATCCTTCAATTTTGGTTTCTGGAGATTTGATGATTTTAGCCAATCAATTGGAAGAATTGCTTCCTGGAACTATCCATCGAAAGGAGAGGTTCTATGCTTTAGCTCTTTGTTATTACGGAGCAGGGAAGAACGTGGAAGCGCTGGATCTTCTTAGAAAACTGCTGAGTAATAGAGAGGACCCAAGACATGTTCCAAGTTTGTTAATGGATTCTAAGATTTGTTGCGAGAACTTCAGTGTTACAAAAGACCCTGGGGTAAGCTTTGCTCGGATGGCACTTGAGAACTTGGATGGAAAATGTAATCAGTTAGAAAATATGGCCAATTTCTTACTTGGTGTTACACTTTCTGCATACTCGAAATTGGCCATTTCTGATGCTGAGAGGGCTAAGAGACAATCTGAGGCACTTCATACCCTTGAAACTGCCTGCAAATTGAGCAGAATGGAAGACCCTGTTGTATTATACCATCTGAGTTTAGAATACGCTGAGCAACGGAAGTTGGATGCTGCACTTCATTATGCTAAGTGCATTGTAAAACTTGAAGTTGGCTCTAATGTTAAAGGTTGGTTACTGTTATCTAGGGTATTATCCGCACAAAAGCGGTTCTTAGATGCTGAATCTATTATCAATGCTGCTTTGGATCAGACTGGGAAATGGGATCAAGGTGATTTGTTACGAACAAAGGCGAAACTTCAGATCGCTCAGGGCCAGTTAAAGAGTGCCATTGAGACATACACTCAGCTTCTTGCTGTTCTTCAAGTTCATAGTAAAAGTTTTGGTTCTCGGAATAAGCTATTTAAGGACAAAAGAGATCAGATTAGGAATTTGGAAGTTGAAGTATGGCATGATCTTGCTTATGTATACATCAGCCTTTCACAGTGGCGTGACGCAGAGGCCTGCCTTTCAAAATCTCGGGCCATCAAACTATACTCTTCTACTAGATGTTATGCAATAGGGTAA 1056 0.4025 MDGSFVPRNNIEEAILLLMILLRKVTLNRIEWDPSILVSGDLMILANQLEELLPGTIHRKERFYALALCYYGAGKNVEALDLLRKLLSNREDPRHVPSLLMDSKICCENFSVTKDPGVSFARMALENLDGKCNQLENMANFLLGVTLSAYSKLAISDAERAKRQSEALHTLETACKLSRMEDPVVLYHLSLEYAEQRKLDAALHYAKCIVKLEVGSNVKGWLLLSRVLSAQKRFLDAESIINAALDQTGKWDQGDLLRTKAKLQIAQGQLKSAIETYTQLLAVLQVHSKSFGSRNKLFKDKRDQIRNLEVEVWHDLAYVYISLSQWRDAEACLSKSRAIKLYSSTRCYAIG* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g2859 351 SMART tpr_5 310 343 IPR019734 GO:0005515
Ahy11g2859 351 SMART tpr_5 183 216 IPR019734 GO:0005515
Ahy11g2859 351 SMART tpr_5 60 93 IPR019734 GO:0005515
Ahy11g2859 351 SMART tpr_5 218 251 IPR019734 GO:0005515
Ahy11g2859 351 SMART tpr_5 254 287 IPR019734 GO:0005515
Ahy11g2859 351 SUPERFAMILY TPR-like 61 339 IPR011990 GO:0005515
Ahy11g2859 351 PANTHER TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN-CONTAINING PROTEIN-RELATED 1 351 - -
Ahy11g2859 351 Gene3D Tetratricopeptide repeat domain 9 345 IPR011990 GO:0005515
Ahy11g2859 351 PANTHER PROTEIN NPG1 1 351 IPR043376 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g2859 Ahy-Chr11 146216156 146217450 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g2859 2 351 Calmodulin-binding Proteins AT4G28600 53.994 1.57e-113 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g2859 K21843 - gmx:100800762 526.168