Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g2842 ATGATCATGGGATACAAGCCTGCATGGTTGGAAGCACTATACAGAGAGAAGTTCTTTGTGGGATGTTCGTACCATGAGAAGGCGAAGAAGAACGAGAAGAACGTGTGCTGCTTGGATTGCTGCATAAGCATATGTCCACACTGCTTCCCTTCTCACCGCTTCCATAGGCTTCTTCAGGTTCGCCGTTACGTTTACCATGACGTCGTCAGATTAGAAGATCTTCAGAAACTCATTGACTGCTCCAACGTCCAACCTTACACCATTAACAGCGCCAAAGTTGTCTTCATCAAGAACAGGCCTCAGAACCGCCAATTCAAATCCTCCGGCAATTACTGCACTTCCTGTGACCGTAGCCTTCAAGAGCCTTTTATTCATTGCTCTCTTTCATGCAAGGTGGAATTTGTGCTGAAACACTACAAGGATCTATCACCATACTTAAGGACATGCAAGACCCTACAGCTAGGTCCAGACTTCTTGATCCCACAAATTCAGGAGATGGGGGAGGAGGAGATGACAACTACTGGAGGTTCATCATCAACAATTGTGGACAGTGATGAGCCAATGAGTTCTTGCTATTCATGGGGTTCGTCATCAGGATCAGAGAACATGAGCATGGGTTGCAGTACTGATCAGAACATAGTGAGGAAGAAGAGGAGTGGATGGAAGGTGTGTGCAAGGCTAATGACAAATTCCAGCACCAACAAAGTTTCGGATGAAGACATGGCCACCAGTATCAGTAGGAGAAAAGGCATTCCTCATAGATCTCCTCTATGTTAA 777 0.4582 MIMGYKPAWLEALYREKFFVGCSYHEKAKKNEKNVCCLDCCISICPHCFPSHRFHRLLQVRRYVYHDVVRLEDLQKLIDCSNVQPYTINSAKVVFIKNRPQNRQFKSSGNYCTSCDRSLQEPFIHCSLSCKVEFVLKHYKDLSPYLRTCKTLQLGPDFLIPQIQEMGEEEMTTTGGSSSTIVDSDEPMSSCYSWGSSSGSENMSMGCSTDQNIVRKKRSGWKVCARLMTNSSTNKVSDEDMATSISRRKGIPHRSPLC* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g2842 258 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 5 258 - -
Ahy11g2842 258 MobiDBLite consensus disorder prediction 235 258 - -
Ahy11g2842 258 Pfam PLATZ transcription factor 61 132 IPR006734 -
Ahy11g2842 258 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 5 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g2842 Ahy-Chr11 145994299 145995824 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Ahy11g2842 PLATZ 5.20E-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g2842 - - gmx:100810461 402.519
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2842 11 145994299 145995824 Ahy11g2842 11 145994299 145995824 ECH
Ahy11g2842 11 145994299 145995824 Ahy1g2117 1 98267985 98269740 hybridization