Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g2839 ATGGTGAGCTTGAAAGGGGGAACAAGGCCACCATGGGTGGGGCTGGGAGCTTCCGTGTGGGTTCAGGTGGCATCGGGAAATGGTTACACTTTCCCGCTCTATTCCCACTCTTTGAAGTCTGTCATGGGCTTCAACCAGCAGCAACTCACTCTCCTCGGTGTTGCCAACGACATCGGCGAGAATGTTGGTATTCTTCCTGGCCTTGCTTCCAACCACTTCCCTCCATGGCTTCTCCTCTTCATCGGTGCTCTCTTCTCCTTCATTGGCTACGGCCTTCTCTGGCTCCCCCTCAGCCACACCCTCTCTTCTCTTCCCTACGCCTTGCTATGGTTTTCCCTGGTTGTTGCAACCAACAGTTGTGCGTGGTTAACCACCGGGATTCTTGTAACCAACATGAGGAATTTCCCTATCAGCAGAGGCACGGTGGCCGGAATCCTCAAAGGGTACGGCGGCCTCAGCGCCGCCGTCTTTACTCAAATCTACGGGATAGTTCTTCACAATTCATCCTCCAATTTCCTCTTGTTCCTTGCAATTGGTATCCCTGCTGTGTGCTTCAGCATGATGTTTCTTGTTAGGCCTTGCACTCCACTTTCCACTGAAGATTCCAAAGAGAAAGGGCATTTTCTGTTCATCCAAGCTTCAAGTGTGGTATTGGGTTTATACATTCTTGCCACAAACATATTTGGTGACATTCTCCGCTTGAGTAGTGCACTTTCCTACCTCTTGGTGGCTCTCATGATTCTACTCCTCATGGCTCCACTTGCTATCCCTATCAAGATGACACTCTGTCCCAAAACAGGATCCACCCGATCACAAACACCTAATGCCTCCTCAGAACGTTTGGCCAAAGAAGACAACACCGAGCCGCTGCTGGCGTCTTCCTCGGCCAGTGGCCTCGGAAGCTTCTACGACACGGATCCCTCGGCCGAGGTGGCAATGCTTCTGGCCGTGGGCGAGGGAGCCGTGAAGAAGAAGAGAAGGCCTAAAAGAGGGGAAGATTTTAAGTTCACAGAGGCAATAGTAAAGGCTGATTTCTGGCTACTGTTTTTCATTTACTTTGTTGGTGTTGGAACTGGGGTCACTGTAATCAACAATCTAGCACAAATTGGCATTGCACAAGGTGAGGATGATACCACTATCTTGTTGTCCCTTTTCAGCTTTTTCAACTTTGTTGGTCGCCTTGGTGGAGGAGTTCTTTCAGAACATTTTGTCAAAACGAAAACAATTCCGCGCACGGTTTGGATGACATGCACTCAGGTAATGATGATGATCCTATACATCCTGTTTGCATATGCTATCAATGGGGCCCTATACCCTGCCATTGCACTTCTTGGAATCTGCTATGGAGTGCAATTCACAGTGGTGATTCCAACTGTGTCTGAGCTTTTCGGTTTGGAGCACTTTGGGATGTTGAGCAACTTCATATTCATGGGGAATCCACTTGGTGCATTCCTCTTCTCAGCACTTCTAGCAGGTACTGTGTATGACAATGAGGCTACAAGGCAACAAAGCATGGGAATCATTCCTTCAAGTGCTTCTTGCTTGGGCCCTGATTGCTTTAAGATCACATTCCTCACACTTTCTGCTGTTTGTGCTGTTGGTGCCTTTGCTGGTACCATCTTGGCTGTAAGAATTAAGCCTGTTTACCAAATGCTTTATGCTGGTGGTTCTTTCAAGTTACCACAAACTTCTTCACTTCACTAA 1704 0.483 MVSLKGGTRPPWVGLGASVWVQVASGNGYTFPLYSHSLKSVMGFNQQQLTLLGVANDIGENVGILPGLASNHFPPWLLLFIGALFSFIGYGLLWLPLSHTLSSLPYALLWFSLVVATNSCAWLTTGILVTNMRNFPISRGTVAGILKGYGGLSAAVFTQIYGIVLHNSSSNFLLFLAIGIPAVCFSMMFLVRPCTPLSTEDSKEKGHFLFIQASSVVLGLYILATNIFGDILRLSSALSYLLVALMILLLMAPLAIPIKMTLCPKTGSTRSQTPNASSERLAKEDNTEPLLASSSASGLGSFYDTDPSAEVAMLLAVGEGAVKKKRRPKRGEDFKFTEAIVKADFWLLFFIYFVGVGTGVTVINNLAQIGIAQGEDDTTILLSLFSFFNFVGRLGGGVLSEHFVKTKTIPRTVWMTCTQVMMMILYILFAYAINGALYPAIALLGICYGVQFTVVIPTVSELFGLEHFGMLSNFIFMGNPLGAFLFSALLAGTVYDNEATRQQSMGIIPSSASCLGPDCFKITFLTLSAVCAVGAFAGTILAVRIKPVYQMLYAGGSFKLPQTSSLH* 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g2839 567 SUPERFAMILY MFS general substrate transporter 234 547 IPR036259 -
Ahy11g2839 567 CDD MFS_Mch1p_like 10 535 - -
Ahy11g2839 567 Pfam Nodulin-like 11 258 IPR010658 -
Ahy11g2839 567 MobiDBLite consensus disorder prediction 266 296 - -
Ahy11g2839 567 MobiDBLite consensus disorder prediction 266 280 - -
Ahy11g2839 567 PANTHER NODULIN-LIKE/MFS TRANSPORTER 3 565 - -
Ahy11g2839 567 Gene3D MFS general substrate transporter like domains 341 548 IPR036259 -
Ahy11g2839 567 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 3 565 - -
Ahy11g2839 567 SUPERFAMILY MFS general substrate transporter 17 196 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g2839 Ahy-Chr11 145959528 145961956 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g2839 5 567 Nodulin-like Gene Family AT1G80530 55.477 0.0 642
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g2839 - - gmx:100787328 822.002
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2839 11 145959528 145961956 Ahy11g2839 11 145959528 145961956 ECH
Ahy11g2839 11 145959528 145961956 Ahy1g2120 1 98319347 98321828 hybridization
Ahy11g2839 11 145959528 145961956 Ahy13g2538 13 76563829 76567394 PCT
Ahy13g2538 13 76563829 76567394 Ahy11g2839 11 145959528 145961956 PCT