Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g2793 ATGGAGAACAAGTGCGGTTGCTGGTCTGTCCTCAAACGCGGTGTTAGAGCAACTGAGACAAGATACCTGAATGCTAGCAATCGAGAACTATGCCCTCCGAATGAAGCTAGAGTATCTTCTGACAATCCTGATCCTCCACCTCAGGAGAATAAGGCTCCTTGCCCACTTCTTAAATTTACATTTCAAGAACTTAAAGCTGCAACCGGAAATTTCAGACCGGATAGTATTCTTGGGGAGGGTGGTTTTGGTTATGTTTTCAAAGGGTGGATAGAGGAAGACGGAACCGCCCCGGCGAAACCTGGGTCAGGGGTTACCGTGGCTGTCAAAAACTTAAAGCCAGATGGTCTTCAGGGCCATAGAGAATGGGTGGCTGAGGTTACCTTTCTCGGACAGCTTCATCATCCTAACCTTGTCAAACTTATTGGCTACTGCATTGAAGATGATCAGAGGCTTCTTGTATATGAGTTTATGACCCGGGGAAGTCTAGAGAATCATCTTTTCAGAAGAACCGTACCTCTTCCGTGGTCCAACAGGGTTAAGATTGCACTTGGTGCAGCAAAAGGATTGGCCTTCCTCCATAATGGTCCTGAACCAGTCATTTATAGAGATTTTAAAACATCAAATATTTTGCTTGATACGGAATATAATGCAAAGCTTTCAGATTTTGGTCTAGCAAAAGCAGGGCCTCAAGGAGACAAGACGCATGTTTCTACCCGAGTTGTCGGAACATATGGCTATGCTGCTCCAGAATATGTCATGACAGGGCACTTGACGGCTAAAAGTGATGTTTATAGTTTCGGAGTTGTATTACTTGAGATTTTAACAGGAAGAAGATCGATGGACAAGAAGCGCCCGAGCGGGGAACAGAATCTTGTTTCATGGGCTAGGCCATATTTAGCTGACAAGAGAAAGCTATATCAACTTGTGGATCCTCGGCTGGAATTAAATTATTCTCTAAAAGGGGTGCAGAAAATCTCTCAGTTAGCTTACAGTTGCCTCAGTAGAGACCCGAAATGCCGTCCCAACATGGACGAAGTGGTGAAAGCTCTGATGCCGCTGCAAGATCTCAATGACCTTGCAATCTTGTCATATCACTCTCGAATATCCCAGCAAGGGCGGCGAAAAAAGAAATCGGATGGAACTCCACATCTCAGCTACACACAATCCAAGAGCATCATCAGGGCTTCTCCCTTGAATGCCAGCAAGCAGCGTCGATGA 1218 0.4548 MENKCGCWSVLKRGVRATETRYLNASNRELCPPNEARVSSDNPDPPPQENKAPCPLLKFTFQELKAATGNFRPDSILGEGGFGYVFKGWIEEDGTAPAKPGSGVTVAVKNLKPDGLQGHREWVAEVTFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTVPLPWSNRVKIALGAAKGLAFLHNGPEPVIYRDFKTSNILLDTEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVSWARPYLADKRKLYQLVDPRLELNYSLKGVQKISQLAYSCLSRDPKCRPNMDEVVKALMPLQDLNDLAILSYHSRISQQGRRKKKSDGTPHLSYTQSKSIIRASPLNASKQRR* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g2793 405 SUPERFAMILY Protein kinase-like (PK-like) 53 354 IPR011009 -
Ahy11g2793 405 Gene3D Transferase(Phosphotransferase) domain 1 157 369 - -
Ahy11g2793 405 CDD STKc_IRAK 77 353 - -
Ahy11g2793 405 Gene3D Phosphorylase Kinase; domain 1 40 156 - -
Ahy11g2793 405 ProSiteProfiles Protein kinase domain profile. 71 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy11g2793 405 MobiDBLite consensus disorder prediction 31 52 - -
Ahy11g2793 405 Pfam Protein tyrosine and serine/threonine kinase 75 350 IPR001245 GO:0004672|GO:0006468
Ahy11g2793 405 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672|GO:0006468
Ahy11g2793 405 PANTHER OS01G0588500 PROTEIN 51 373 - -
Ahy11g2793 405 PANTHER OS01G0588500 PROTEIN-RELATED 51 373 - -
Ahy11g2793 405 ProSitePatterns Protein kinases ATP-binding region signature. 77 109 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g2793 Ahy-Chr11 145424912 145427883 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g2793 59 350 Glycoside Hydrolase AT3G07070 55.743 2.25e-111 331
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Ahy11g2793 PK_Tyr_Ser-Thr 1.40E-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g2793 - - gmx:100305441 764.222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2793 11 145424912 145427883 Ahy11g2793 11 145424912 145427883 ECH
Ahy11g2793 11 145424912 145427883 Ahy1g2167 1 98816009 98819027 hybridization