Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g2780 ATGGCTACTAACATTGGAATTCTACTGCTACTAATTGTGGCATCATCACTAGCACAAGCTGCACAGCATGTAGTTCCATGGATGATTCCTACTACTCAAGGCTCCTCCTTCTACTCCAATTTGTTTGCTAAAACTACATTCAATCTAAACGACATTCTTGTCTTCAACTACACAACTGGGACACATAATGTTGTCACACTTTCAAAGGATGATTTCAAAGATTGCAGTGTCAAGAACAAGATGGAAACATTTGAGGTTGGACCTACAATGATCAAGCTCAATCGAACCGGAGAATACTATTTCGCCTGCGCCTTCCCGGCTCATTGCTCCCTTGGCCAGAAGCTTAGTGTCAATGTCATGGCCTCTTCTTCTTCTTCCCCGGAGGCTGCACCAGCCGTGGCTCCTTCGTCCCCGGCGTCACGCCTCTCTGTTGCTGCTACTTTCTCTGTTCTTCTCATGCTCATTGCCATAAACATCTTGTTCTAG 486 0.4547 MATNIGILLLLIVASSLAQAAQHVVPWMIPTTQGSSFYSNLFAKTTFNLNDILVFNYTTGTHNVVTLSKDDFKDCSVKNKMETFEVGPTMIKLNRTGEYYFACAFPAHCSLGQKLSVNVMASSSSSPEAAPAVAPSSPASRLSVAATFSVLLMLIAINILF* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g2780 161 ProSiteProfiles Phytocyanin domain profile. 21 121 IPR003245 GO:0009055
Ahy11g2780 161 Gene3D - 23 133 IPR008972 -
Ahy11g2780 161 ProSitePatterns Type-1 copper (blue) proteins signature. 97 113 IPR028871 -
Ahy11g2780 161 PANTHER PLASTOCYANIN-LIKE DOMAIN PROTEIN 5 150 - -
Ahy11g2780 161 SUPERFAMILY Cupredoxins 32 119 IPR008972 -
Ahy11g2780 161 PANTHER BLUE COPPER PROTEIN 5 150 IPR039391 GO:0009055
Ahy11g2780 161 Pfam Plastocyanin-like domain 35 113 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g2780 Ahy-Chr11 145245758 145246691 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g2780 7 161 Phytocyanin Superfamily AT2G25060 28.049 2.43e-20 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g2780 - - pvu:PHAVU_003G166500g 140.198
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2780 11 145245758 145246691 Ahy1g2177 1 98969239 98970302 hybridization