Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g2776 ATGATGTCGAGCTGCAGCATGGATGCTGGACCTGAGCAACTGTGCTACATACCCTGCAACTTTTGCAACATTGTTCTTGCGGTGAGCGTTCCATGCAGCAGCTTGTTCGACATGGTAACGGTTCGATGCGGTCACTGCACCAATCTCTGGTCCGTAAACATGGCTGCGGCCTTTCAATCACTCTCATGGCAAGATCTTCAGGGCCCTGGGCAGTGCAATCAGGAGTATAGGATTGACACAAATATTAATATGAATAATGGTGGCTCCTCTTCCAAATGCAACAATAGTAGTAGGCTTGCATCAATGCGTGCACCTACCAATCATGTTACTCAGGAAAGGGCTGTCAACCGCCCACCCGAGAAGAGGCAGCGCGTACCTTCTGCTTATAATCAGTTCATAAAGGAAGAGATCCAGAGGATTAAGGCTAATAATCCTGATATCAGTCACAGAGAAGCATTCAGTACTTCAGCAAAAAACTGGGCACATTTTCCTCATATTCATTTTGGGCTAATGTTGGAGAGCAACAATCAAGCTAATAAGATGGATAATGCCTCTGAGAAGCATTTGATGTCAAGGGCTGCACCTGCACTGTTGAATAAATGA 603 0.4577 MMSSCSMDAGPEQLCYIPCNFCNIVLAVSVPCSSLFDMVTVRCGHCTNLWSVNMAAAFQSLSWQDLQGPGQCNQEYRIDTNINMNNGGSSSKCNNSSRLASMRAPTNHVTQERAVNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTSAKNWAHFPHIHFGLMLESNNQANKMDNASEKHLMSRAAPALLNK* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g2776 200 SUPERFAMILY HMG-box 115 163 IPR036910 -
Ahy11g2776 200 Gene3D High mobility group box domain 109 193 IPR036910 -
Ahy11g2776 200 PANTHER AXIAL REGULATOR YABBY 5 2 188 - -
Ahy11g2776 200 Pfam YABBY protein 11 170 IPR006780 GO:0007275
Ahy11g2776 200 MobiDBLite consensus disorder prediction 102 122 - -
Ahy11g2776 200 PANTHER PROTEIN YABBY 6-RELATED 2 188 IPR006780 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g2776 Ahy-Chr11 145069658 145072819 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g2776 12 178 C2C2-YABBY Transcription Factor Family AT2G26580 72.455 1.73e-83 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Ahy11g2776 YABBY 2.10E-71 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g2776 K25796 - gmx:100499942 338.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2776 11 145069658 145072819 Ahy1g2182 1 99060042 99063259 hybridization