Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g2772 ATGCAGAAGAATCAAAAGACGTTTGCTACTATAGTCTTTAGTATTCACCCTGTGGTTCAGTTTCTGGAAGGAGAACTTCTCATAGTGTGTTTGTATTCCAATCCAGGTGGACGCTTTGCCTCAAGGGAAAAAATGAGCCTTCTAAAGAACTGCCGAAGTTTTCTGTCAAACTTTTTCTTCATTCCAGTGGGCATGTTGCAGCGAAATTCCAATATGACCAGGTTATGGATGTTCCCGCTTTCTTCCTTGTCCGAAGCAGAGAAGGTTCTAGGAGAAATATCTAATTATAAAGTTCAGTTGGAGGCGGTAAAAGCCAAAATCAAATCTGCTAAATCAAAAGATGAGTCTGAATCTCTTAAATTTACTCAAAAGAAACTGATTAACAAGGCAGGTTGCAAGTTTCTTATATTTGCGCACCATCAGCCAATGATAGATGCAATACATGAGTGCCTTCTTAAGAAAAAAGTGGGTTGCATCTGGATTGATGGAGGTACACCCGCTGCATCAAGGCAACAATTGGTTACAGATTTCCAGGAAAAGGATTATATCAAGGCAGCTGTACTATCCATTAAAGCGGGAGGAGTTGGATTAACTTTAACTGCTGCAAGCACAGTTATCTTTACAGAACAATCCTGGACTCCAGGTGACCTAATTCAGGCCAAAGATCGTGCATATAGAATTGGTCAGGGATGTGGTGCAATTCAAACCGGATAA 714 0.4062 MQKNQKTFATIVFSIHPVVQFLEGELLIVCLYSNPGGRFASREKMSLLKNCRSFLSNFFFIPVGMLQRNSNMTRLWMFPLSSLSEAEKVLGEISNYKVQLEAVKAKIKSAKSKDESESLKFTQKKLINKAGCKFLIFAHHQPMIDAIHECLLKKKVGCIWIDGGTPAASRQQLVTDFQEKDYIKAAVLSIKAGGVGLTLTAASTVIFTEQSWTPGDLIQAKDRAYRIGQGCGAIQTG* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g2772 237 PANTHER SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY A-LIKE PROTEIN 1 117 229 IPR030101 GO:0006281|GO:0031297|GO:0036310
Ahy11g2772 237 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 122 237 IPR001650 -
Ahy11g2772 237 Pfam Helicase conserved C-terminal domain 128 228 IPR001650 -
Ahy11g2772 237 Gene3D - 55 231 IPR027417 -
Ahy11g2772 237 Coils Coil 86 113 - -
Ahy11g2772 237 SMART helicmild6 145 228 IPR001650 -
Ahy11g2772 237 PANTHER DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 FAMILY MEMBER 117 229 - -
Ahy11g2772 237 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 119 230 IPR027417 -
Ahy11g2772 237 CDD SF2_C_SNF 129 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g2772 Ahy-Chr11 145012206 145016235 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g2772 104 229 RAD5 or RAD16-like Gene Family AT1G05120 30.709 9.63e-14 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g2772 K14440 - ahf:112723272 442.195