Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g2705 ATGAGCTTGACAGCAGTGGTGAAAGCTTCCCCTCAGAACTTTGTAGGCAATGATGTTGCTGCCAGCAGAGGCAAGTCCTGCAGGCTTCGATGGTGTAACCAGCTCTCCCCACCCGTGGAGCATCGGGCCTTCACCCCCGAAGAGGACGACACCATAATCAGAGCTCATGCTCAGTGTGGCAACAAGTGGGCCACCATAGCCCGACTCCTTTCCGGCAGAACCGACAATGCCATTAAGAACCACTGGAACTCCACCCTCAAACGCAAGTGCGCCTCCATAGGCCCCATCGACGATCCTCACTTCGCGCAGCCACTCAAATGCTTCGTCAGCACCAGCACCGCTATACCCGTGTCAACGGTGGTGGTGAGGTACTCGTTGCCGATGCTGATGGTGATGACGAAGGTGGCAGGCCGTGGCCCAACTCATCCATGCCCTTCACCACTTTGA 447 0.5682 MSLTAVVKASPQNFVGNDVAASRGKSCRLRWCNQLSPPVEHRAFTPEEDDTIIRAHAQCGNKWATIARLLSGRTDNAIKNHWNSTLKRKCASIGPIDDPHFAQPLKCFVSTSTAIPVSTVVVRYSLPMLMVMTKVAGRGPTHPCPSPL* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g2705 148 ProSiteProfiles Myb-like domain profile. 36 86 IPR001005 -
Ahy11g2705 148 CDD SANT 43 86 IPR001005 -
Ahy11g2705 148 Gene3D - 42 100 - -
Ahy11g2705 148 SUPERFAMILY Homeodomain-like 24 90 IPR009057 -
Ahy11g2705 148 Pfam Myb-like DNA-binding domain 43 85 IPR001005 -
Ahy11g2705 148 SMART sant 40 88 IPR001005 -
Ahy11g2705 148 PANTHER MYB PROTEIN-RELATED 18 114 - -
Ahy11g2705 148 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 36 90 IPR017930 -
Ahy11g2705 148 PANTHER TRANSCRIPTION FACTOR MYB73 18 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g2705 Ahy-Chr11 143612583 143613736 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g2705 6 94 MYB Transcription Factor Family AT4G37260 70.330 3.22e-41 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Ahy11g2705 Myb_DNA-binding 6.60E-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g2705 K09422 - aip:107615096 230.335