Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g2662 ATGCTTCAGGCATTCATGAATCTACGCGCTCTCTGTTTGAGGCCATTCGGGCTCGCTGACGACAAGGTCGACACTTCCCCCGTCGAAGTCAACGGCGGCAGCTTCAGAGGCAGCGGAAGCTTCAAAGGCGGCGGCGGCGCAAGAGAAGGCAAGGACAGCCTCCTCTGGTCTCGCGACGTCGGAAAATATGGCTCCGGCGATTTCTCCATGGCCGTCGTCCAGGCCAATCAGGTCCTTGAAGACCAGAGCCAGATAGAGTCCGGTCCCCTTGGCACCTTTGTTGGCATCTACGACGGTCACGGAGGACCCGACGCCGCGCGATTCGTATGCGATCACCTCTTTCGCCATTTTCAAGCAATATCAGCTGAAACAAATGGAGGCGTGATCACTGAGACCATCGAGAGGGCATTCCGCCAAACAGAAGAAGGGTATGCTGCTCTTGTGTCAGACTTGTGGAGCACTCGGCCTCAAGTCGCAAGCGCCGGGACTTGTTGTCTGGTTGGAGTGATATTTCAGCAGACACTCTTTGTGGCAAACCTTGGAGACTCCCGCGTTGTATTGGGTAAGAAAGTTGGCAACACAGGAGGCGTTGCTGCAATTCAGCTTTCTACAGAACACAATGCAAATGTTGAAGCTGTGCGGCAGGAGCTTAAAGAGTTACACCCACATGATCCCCAGATTGTTGTCCTCAAACATGGAGTGTGGAGAGTCAAAGGCATTATTCAGATTTCTAGATCTATAGGTGACGTATATATGAAAGATGCACAATTTAACCGGGAACCACTTCCTGCAAAATTCAGACTTCCTGAACCCATGCACATGCCTATCTTGAGTGCTGAACCCGCTATTATTTCTCATCGACTGCAACCAAATGATTCTTTCATTATATTTGCATCAGATGGCTTATGGGAGCACCTGAGCAATGAAAAGGCTGTGGAAATTGTTAGCAGCAATCCACACACGGGTAGTGCCAAGAAACTTGTCAAGGCTGCCCTACACGAAGCAGCAAGAAAACGAGAGATGCGATATTCAGACCTGCGCAAGATAGACAAGAAGGTCCGACGCCATTTTCATGATGATATATCTGTTATTGTTTTATTCTTGAACCACGATCTTATATCCAAAGGCACAGTGCTAGACCCACCACTCTCACTTCGAAGCGCACTCGATCACTGA 1176 0.4983 MLQAFMNLRALCLRPFGLADDKVDTSPVEVNGGSFRGSGSFKGGGGAREGKDSLLWSRDVGKYGSGDFSMAVVQANQVLEDQSQIESGPLGTFVGIYDGHGGPDAARFVCDHLFRHFQAISAETNGGVITETIERAFRQTEEGYAALVSDLWSTRPQVASAGTCCLVGVIFQQTLFVANLGDSRVVLGKKVGNTGGVAAIQLSTEHNANVEAVRQELKELHPHDPQIVVLKHGVWRVKGIIQISRSIGDVYMKDAQFNREPLPAKFRLPEPMHMPILSAEPAIISHRLQPNDSFIIFASDGLWEHLSNEKAVEIVSSNPHTGSAKKLVKAALHEAARKREMRYSDLRKIDKKVRRHFHDDISVIVLFLNHDLISKGTVLDPPLSLRSALDH* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g2662 391 PANTHER PROTEIN PHOSPHATASE 2C 42-RELATED 4 391 - -
Ahy11g2662 391 SUPERFAMILY PP2C-like 77 369 IPR036457 -
Ahy11g2662 391 PANTHER ALPHABET, ISOFORM E-RELATED 4 391 - -
Ahy11g2662 391 SMART PP2C_4 54 366 IPR001932 -
Ahy11g2662 391 ProSitePatterns PPM-type phosphatase domain signature. 93 101 IPR000222 GO:0043169
Ahy11g2662 391 Gene3D - 56 377 IPR036457 -
Ahy11g2662 391 Pfam Protein phosphatase 2C 91 338 IPR001932 -
Ahy11g2662 391 ProSiteProfiles PPM-type phosphatase domain profile. 67 368 IPR001932 -
Ahy11g2662 391 CDD PP2Cc 68 368 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g2662 Ahy-Chr11 142875452 142879730 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g2662 1 388 PP2C-type Phosphatase Gene Family AT4G38520 55.668 5.55e-153 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g2662 K01102 - gmx:100790813 644.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2662 11 142875452 142879730 Ahy11g2662 11 142875452 142879730 ECH
Ahy11g2662 11 142875452 142879730 Ahy1g2274 1 100695953 100700201 hybridization
Ahy11g2662 11 142875452 142879730 Ahy14g0907 14 14628589 14632661 PCT
Ahy11g2662 11 142875452 142879730 Ahy4g0822 4 12873128 12877148 PCT
Ahy14g0907 14 14628589 14632661 Ahy11g2662 11 142875452 142879730 PCT
Ahy4g0822 4 12873128 12877148 Ahy11g2662 11 142875452 142879730 PCT