Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g2635 ATGGCAAAGTCGAAGAACCACACAGCTCACAACCAGTCCTACAAGGCCCACAAGAATGGCATCAAGAAGCCAAAGAAGCACCGCCACACTTCCACCAAAGGGATGGATCCAAAGTTTTTGAGGAACCAGAGGTATGCAAGGAAGCATAACAAGAAGAGCGACGAGGGATCCGCTGAGGAAGAGTAA 186 0.4946 MAKSKNHTAHNQSYKAHKNGIKKPKKHRHTSTKGMDPKFLRNQRYARKHNKKSDEGSAEEE* 62
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g2635 61 Gene3D - 1 61 - -
Ahy11g2635 61 MobiDBLite consensus disorder prediction 40 61 - -
Ahy11g2635 61 PANTHER 60S RIBOSOMAL PROTEIN L29 1 61 IPR002673 GO:0003735|GO:0005840|GO:0006412
Ahy11g2635 61 MobiDBLite consensus disorder prediction 1 32 - -
Ahy11g2635 61 PANTHER 60S RIBOSOMAL PROTEIN L29 1 61 - -
Ahy11g2635 61 Pfam Ribosomal L29e protein family 3 42 IPR002673 GO:0003735|GO:0005840|GO:0006412
Ahy11g2635 61 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g2635 Ahy-Chr11 142592741 142593489 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g2635 1 61 Cytoplasmic Ribosomal Protein Gene Family AT3G06680 81.967 5.98e-32 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g2635 K02905 - twl:119997923 124.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2635 11 142592741 142593489 Ahy11g2635 11 142592741 142593489 ECH
Ahy11g2635 11 142592741 142593489 Ahy1g2297 1 100901582 100902322 hybridization