Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g2632 ATGATGATGGCAAATAACTTTGCGGGCCGGTTGGTAGGCTCAGAGATTCATGGATTCCACACATTGCAAGACTTGGATTTGGGGAACATAATGGAGGAAGCAAGAACCAGATGGCTTCGTCCCAATGAGATTCACGCCATACTTTGCAATTCCAAGTACTTCACAATCAATGTCAAGCCAGTGAATTTGCCCACATGTGGTACTATTGTATTATTTGACCGCAAGATGCTTAGGAACTTTCGGAAAGATGGGCACAACTGGAAAAAGAAAAAGGATGGTAAAACTGTTAAAGAAGCTCATGAGCACTTAAAGGTTGGTAATGAAGAAAGGATCCATGTCTATTATGCACATGGACAAGATAACCCAGGCTTTGTTCGTAGATGTTATTGGTTACTTGACAAGAGTTTGGAACACATAGTCCTTGTTCATTATCGTGAAACACAGGAGTTGCAAGCTTCTCCTGCCGCACCCATAAATTCGCACTCTAGTTCTGGCTCTGACCCAAATGCCCCATGGATTTTATCCGAAGAAATAGATTCCGGGATCAAAACTACAAATGCTGGTGCAGAGATTAATAACAATATAACCGTCAAGAGTCACGAGCAAAGGCTTCATGAGATTAATACACTTGAATGGGATGACCTAGTGGTTGCAAATGATCCTAACACCTCGACTATTAATGGAGGAGGCAAAGTTCCACATTTTGATCAACAGAATCAAAGTAATCTCAGCAATTGGTTTTATCAGCAGGTAGCCAACAATCTTTCTGCAGAAATCCCTTCTTTTGATAATCTAACGCAACCAATTGCTGGGAGTCACACTTTTCCGGAGAATCTTAATCTTCAGACAGACAATCAAATGAATCCAAATGAGCAGATAAATCATAATGTCTTAGTTAATGGTGTTTTCTTGGACACTTTGGGCAATGGTGGATTGCAAAGTCAGGATAGCTTTGGAATGTGGGTGAACCATATGTTGTCGGATTCGCCATGTTCAGTAGATGAGTCAGCTGTTGAATCATCAGTGTCATCCATTCACGAATCATATTCATCTCTAGTAGGGGATGATAAGCAAACTTCTTTGCCAGAACAAGTATTTAATCTCACTGATGTGTCACCTGCATGGGTGCCTTCTACTGAGAAATCAAAGATCCTCGTGACTGGATTCTTTCATAAGGATGCTGACCTTTCAAAGTCCAATCTATTGTGTGTCTGTGGTGATGTAAGTGTTCCTGTAGAATGTGTTCAGGTTGGGGTCTACCGATGTTGGGTACCTCCACATTCTCCTGGATTTGTGAATCTCTACTTGAGCTTTGATGGCCATAAACCTATCAGCCAAGTTGTTAATTTTGAGTATCGTACTCCCATTCTGCATGATCCTGCGGCTTTTATGGAAAACAATGACAACTGGGACAAGTTCCAATTCGAGATGAGGCTTTCTTATCTGCTTTTTACCAAAAAGAATAGTCTTGATGTCTTCTCTTGTACAGTATCACCTAAGAGACTAAAGGAGGCGAGAAACTTTGCCATCAGAACGTCGTTTATTTCCAATAGTTGGCAATGCTTGATGAAGTCAACTCAATACAACAGAATTCCATATTCACAAGCAAAAGAAGACCTATTTGGAATTTCTTTAAGAAGCAGACTAAAGGAATGGATTTTGGAAAGAATTATTTTAGGCTGTAAGACTACTGAATATGATGCACAAGGCCAAAGTGTAATCCATTTGTGCGCGATTCTGGATTATACTTGGGCTGTTTCCCTATTTTCATGGTCAGGCTTGTCACTGGATTTCCGTGACAAGTTTGGGTGGACAGCTCTTCATTGGGCAGCATATTATGGAAGGGAGAAAATGGTTGCAACTCTTTTGTCGGCTGGGGCAAAGCCAAATTTGGTTACAGATCCAACTCCACAAAATCCTGGTGGACAAACTGCTGCTGATCTCGCATATATGAACGGTTATGATGGCTTAGCAGCTTATCTTTCAGAAAAGGCTCTGGTGAGGCAGTTCAATGACATGAGCTTAGCTGGAAATATCAGTGGCCAGCTAGAAACCAACACAACTGACCCAGAAGATCCTGAGAACCTTTCAGAGGACCAGCTGTACCTGAAGGATACATTGGCAGCTTATCGAACAGCTGCTCAGGCAGCAGCACGCATACAAGCTGCATTTAGAGAGCATTCCCTAAAACTGCAAACTGAAACCATTGAGCTTTTGACACCAGAGGCTGAAGCACGCAAAATAGTTGCAGCAATGAAGATTCAGCACGCCTTTAGGAATTTCGAGTCGAGGAAAATGATGAAAGCTGCTGCTCGCATTCAGTACACATACCGCACATGGAAGATTCGCAGAGAATTCCTCAACATGCGTCATCAGGCTATTAAAATTCAAGCTGCTTTCCGGTGCTTTCAATTGAGGAAGCATTATCGTAAAATTTTGTGGTCTGTCGGGGTGGTCGAGAAAGCACTATTGCGTTGGCGTTTAAAGAGAAAAGGTTTGCGTGGGCTGCATGTTAACAATGCCGATCAGAAGCAGGAAGGTGATGGAGAGGAGGAATTCTTTCGAATTGGTAGGAAGCAAGCTGAAGAGCGTGTCGAGAGATCTGTAGTGCGTGTGCAGGCCATGTTCCGTTCAAAGAAGGCACAACAAGATTATAGGAGGATGAAGCTGGCCCTTAATCAAGCAAATCTGGATCGGGAATATGAAGAATTCCTTGGTACGGAAGATAACATGGAAATTTAA 2742 0.423 MMMANNFAGRLVGSEIHGFHTLQDLDLGNIMEEARTRWLRPNEIHAILCNSKYFTINVKPVNLPTCGTIVLFDRKMLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGNEERIHVYYAHGQDNPGFVRRCYWLLDKSLEHIVLVHYRETQELQASPAAPINSHSSSGSDPNAPWILSEEIDSGIKTTNAGAEINNNITVKSHEQRLHEINTLEWDDLVVANDPNTSTINGGGKVPHFDQQNQSNLSNWFYQQVANNLSAEIPSFDNLTQPIAGSHTFPENLNLQTDNQMNPNEQINHNVLVNGVFLDTLGNGGLQSQDSFGMWVNHMLSDSPCSVDESAVESSVSSIHESYSSLVGDDKQTSLPEQVFNLTDVSPAWVPSTEKSKILVTGFFHKDADLSKSNLLCVCGDVSVPVECVQVGVYRCWVPPHSPGFVNLYLSFDGHKPISQVVNFEYRTPILHDPAAFMENNDNWDKFQFEMRLSYLLFTKKNSLDVFSCTVSPKRLKEARNFAIRTSFISNSWQCLMKSTQYNRIPYSQAKEDLFGISLRSRLKEWILERIILGCKTTEYDAQGQSVIHLCAILDYTWAVSLFSWSGLSLDFRDKFGWTALHWAAYYGREKMVATLLSAGAKPNLVTDPTPQNPGGQTAADLAYMNGYDGLAAYLSEKALVRQFNDMSLAGNISGQLETNTTDPEDPENLSEDQLYLKDTLAAYRTAAQAAARIQAAFREHSLKLQTETIELLTPEAEARKIVAAMKIQHAFRNFESRKMMKAAARIQYTYRTWKIRREFLNMRHQAIKIQAAFRCFQLRKHYRKILWSVGVVEKALLRWRLKRKGLRGLHVNNADQKQEGDGEEEFFRIGRKQAEERVERSVVRVQAMFRSKKAQQDYRRMKLALNQANLDREYEEFLGTEDNMEI* 914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g2632 913 Pfam CG-1 domain 33 146 IPR005559 GO:0003677
Ahy11g2632 913 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 16 912 - -
Ahy11g2632 913 Gene3D - 544 672 IPR036770 -
Ahy11g2632 913 Gene3D - 764 813 - -
Ahy11g2632 913 Coils Coil 878 898 - -
Ahy11g2632 913 ProSiteProfiles Ankyrin repeat region circular profile. 602 630 - -
Ahy11g2632 913 SMART iq_5 864 886 IPR000048 GO:0005515
Ahy11g2632 913 SMART iq_5 788 810 IPR000048 GO:0005515
Ahy11g2632 913 SMART iq_5 765 787 IPR000048 GO:0005515
Ahy11g2632 913 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 16 912 - -
Ahy11g2632 913 ProSiteProfiles IQ motif profile. 866 894 IPR000048 GO:0005515
Ahy11g2632 913 SUPERFAMILY E set domains 367 453 IPR014756 -
Ahy11g2632 913 SMART ANK_2a 641 672 IPR002110 GO:0005515
Ahy11g2632 913 SMART ANK_2a 602 631 IPR002110 GO:0005515
Ahy11g2632 913 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 755 816 IPR027417 -
Ahy11g2632 913 SMART CG_1_2 30 148 IPR005559 GO:0003677
Ahy11g2632 913 ProSiteProfiles IQ motif profile. 750 776 IPR000048 GO:0005515
Ahy11g2632 913 ProSiteProfiles Ankyrin repeat profile. 602 634 IPR002110 GO:0005515
Ahy11g2632 913 SUPERFAMILY Ankyrin repeat 557 664 IPR036770 -
Ahy11g2632 913 ProSiteProfiles CG-1 DNA-binding domain profile. 27 153 IPR005559 GO:0003677
Ahy11g2632 913 Gene3D Immunoglobulins 362 456 IPR013783 -
Ahy11g2632 913 Pfam IQ calmodulin-binding motif 793 810 IPR000048 GO:0005515
Ahy11g2632 913 Pfam Ankyrin repeats (3 copies) 557 631 IPR002110 GO:0005515
Ahy11g2632 913 ProSiteProfiles IQ motif profile. 789 813 IPR000048 GO:0005515
Ahy11g2632 913 ProSiteProfiles IQ motif profile. 766 795 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g2632 Ahy-Chr11 142575928 142582829 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g2632 30 898 CAMTA Transcription Factor Family AT3G16940 55.161 0.0 916
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Ahy11g2632 CG-1 2.70E-44 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g2632 K21596 - gmx:100793970 1387.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2632 11 142575928 142582829 Ahy11g2632 11 142575928 142582829 ECH
Ahy11g2632 11 142575928 142582829 Ahy14g0955 14 15709644 15716843 PCT
Ahy11g2632 11 142575928 142582829 Ahy4g0863 4 14415918 14423137 PCT
Ahy14g0955 14 15709644 15716843 Ahy11g2632 11 142575928 142582829 PCT
Ahy4g0863 4 14415918 14423137 Ahy11g2632 11 142575928 142582829 PCT