Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g2558 ATGTCTAATGAGGATTATGTAGATGAAACCAATAATGTTGACGGGTTTCACGGAAATTTGGAGAATCCCTTGAGAAACGGTGATGAGCTCCTGGACGACGATATCTTCATGGATGCTAACTTGGCAAATGCAGAAGTTGGTGCTTCTGAACCCAATGAAGGTGCCCATTTTGATCAATTGGATGAATCTTATAAGATTGATGGGTGGGAGGACATAGGAAAGACTGAGTTCTTGAATATTGTAGATGTTGATATAAAAAGATATCATTTCAGTGATCGAGGAGTGGCTTTTGATTTCTACAATGCATTTGCCAAGTCAAGGGGATTTAGTGGTCGAAAAAGTAAGACGCGAAAGCACAATGGGATAATCAATCGACAGAATTTTGTTTGTTGTCGCGAGGGCTTCCGACAAAAAAAGCCAGATAATATGCATACCAGAAAACAAGAGCCTAGAGCTGAAACTAGATGTGGCTGTAAGGCAAAGGTTCAGGTGTCATTTGACGCTGTTAGTGGTCGCTGGATTGTTTCAAAATTTTCTGATTTGCATAATCACGACCTTCTTCCTCCAATTTTTACTGCAATGCTTCCTGGTCACAGGAAAATACCTGCTGCAGACATTGAGCAAATAAATATAATGAGGAAGGGTGGATTAGGCACTGCACATATTTTTGCAGCACTCTCAAGCCAATCTGGTGGTCACCACAATGTTCCCTTTTTTCCCAGGGACTTGTACAATCAAGTCGCACAACAACGTCGACGGTTGAAGGGTGATGCTAGTGCGGCTCTTCAATTTTTGAGGAAGATGAAGTCCATTGATCCTGTCATGGTTATAAGATATGAGGTTGATAGGTTTCACTCGATAAAGAATTTATTTTGGTGTGATGGAATAAGCCAAATGGATTATCAATTGTTTGGTGATGTATTGGCTTTTGACGCTACTTACAAGAAGAACAAATATCATTGTCCGCTTGTCGTTTTTTCGGGTGTTAATAACCATAACCGCACAGTTGTCTTTGCAGCCGCTCTTTTTGCTGGAAGCAATGAAGGGGAAGGCCCCCCAATTTCAGTTATCACAGATGGTGCCCTTTCAATGAAAAATGCAATCGAAAAAGTTTTTCCTAATGCACATCATCGCCTATGTGCTTGGCACCTTATTCGCAATGCCACGAGTAATGTAGGTAATCCTAGGTTCACATCGCAGTTTAAGAAGTGCATGCTGGGTGATTACGAGGTTGGTGTATTCCGTAGTAAGTGGGATCGGATGGTTGAAGAGTTTGATGTGCAAGACAAGCAATGGATAATTGATATGTATGATAACCGTCATAGTTGGGCAACAGCACATATCCGTGGGAAGTTCTTTGCGGGTTTAGGACCACTTCTCGATGTGAGGGGTTGCACTCAGTTATTGCAAAGTATGTCAAGTCCAGATAGTCTAGCAGACTTTGAATGTGCACATGGAGTACCTGTGATGCAAACTCATTTATTGTCATTGGAGAAGTCTGCAGCTAATTTATATACAAGAGAGGTATTTTTTCTATTTCGCCCTATTATTATAAGGTCTGGTTCAATGAAAGTGTTAGATTGCATTGGTGTTGGTTCTTATATGTTATACACGGTGGTTAAGTATGGTAGTCCTAACGATACATGGCAAGTATCTTTCTGTGATTTACCAATGGAGTTTACTTGCTCCTGTATGAGGATGGAGTCATTTGGCATTCCTTGCGAACACATTCTATCTGTTTTAGTTACACTTGACATTTGTGAATTGCCAAAATGTTTAGTTCTAGATAGGTGGACCAAAAATGTGAAACAACAAATACAAGATACAAGGGGGTTCACTTGGGATTGCTTAAAGTCTACCCAATACTGGTGTTTGATGGACTGGTTTAGATTGGTGGCTACACTATCAGCAGGTAAAGATGATAGGTTCAGGAGCATGAGGGATTGGGCAATAAACACAGTGGATAAAATGAAAGCTGATGATATTGCTAGTGCAGTTGCTTCTAGTAGTGCAATTCCTGCCACTCATACAGATCCTCGTGACCCCCCAATTCGTAGAAGAGCTAAGGATCGTGCCGGACAACGGTGTAGTATATGCCGGGAGCTCGGACATAACAAAACTACATGTCCAGATCGGAGTAAGTATGATAGGGATTCACATGAACGGCATAGTCTACCTACAGATGATGATGCATATGAGGCTATGTGGGATGAGGAAGAAGACTTCATTTACGAGGAAGATGAAGGTGAATGTGCGGTAAATTCTAGTTCTGAATCTAGCAGAGATCAAGATATGGAGATAGATGACTCTAATTATGAATTTGGAAATGAGGACGATGGAGTCAATGAAATTAATTAG 2358 0.4097 MSNEDYVDETNNVDGFHGNLENPLRNGDELLDDDIFMDANLANAEVGASEPNEGAHFDQLDESYKIDGWEDIGKTEFLNIVDVDIKRYHFSDRGVAFDFYNAFAKSRGFSGRKSKTRKHNGIINRQNFVCCREGFRQKKPDNMHTRKQEPRAETRCGCKAKVQVSFDAVSGRWIVSKFSDLHNHDLLPPIFTAMLPGHRKIPAADIEQINIMRKGGLGTAHIFAALSSQSGGHHNVPFFPRDLYNQVAQQRRRLKGDASAALQFLRKMKSIDPVMVIRYEVDRFHSIKNLFWCDGISQMDYQLFGDVLAFDATYKKNKYHCPLVVFSGVNNHNRTVVFAAALFAGSNEGEGPPISVITDGALSMKNAIEKVFPNAHHRLCAWHLIRNATSNVGNPRFTSQFKKCMLGDYEVGVFRSKWDRMVEEFDVQDKQWIIDMYDNRHSWATAHIRGKFFAGLGPLLDVRGCTQLLQSMSSPDSLADFECAHGVPVMQTHLLSLEKSAANLYTREVFFLFRPIIIRSGSMKVLDCIGVGSYMLYTVVKYGSPNDTWQVSFCDLPMEFTCSCMRMESFGIPCEHILSVLVTLDICELPKCLVLDRWTKNVKQQIQDTRGFTWDCLKSTQYWCLMDWFRLVATLSAGKDDRFRSMRDWAINTVDKMKADDIASAVASSSAIPATHTDPRDPPIRRRAKDRAGQRCSICRELGHNKTTCPDRSKYDRDSHERHSLPTDDDAYEAMWDEEEDFIYEEDEGECAVNSSSESSRDQDMEIDDSNYEFGNEDDGVNEIN* 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g2558 785 MobiDBLite consensus disorder prediction 710 730 - -
Ahy11g2558 785 ProSiteProfiles Zinc finger SWIM-type profile. 537 585 IPR007527 GO:0008270
Ahy11g2558 785 SUPERFAMILY Retrovirus zinc finger-like domains 682 716 IPR036875 GO:0003676|GO:0008270
Ahy11g2558 785 MobiDBLite consensus disorder prediction 1 20 - -
Ahy11g2558 785 Pfam MULE transposase domain 307 387 IPR018289 -
Ahy11g2558 785 MobiDBLite consensus disorder prediction 668 692 - -
Ahy11g2558 785 MobiDBLite consensus disorder prediction 710 733 - -
Ahy11g2558 785 SMART 26again6 560 587 IPR006564 GO:0008270
Ahy11g2558 785 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 88 615 IPR031052 GO:0006355
Ahy11g2558 785 PANTHER OS02G0262500 PROTEIN 88 615 - -
Ahy11g2558 785 MobiDBLite consensus disorder prediction 745 785 - -
Ahy11g2558 785 Pfam FAR1 DNA-binding domain 98 188 IPR004330 -
Ahy11g2558 785 Pfam SWIM zinc finger 560 581 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g2558 Ahy-Chr11 141551333 141553992 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy11g2558 FAR1 5.10E-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g2558 - - adu:107465142 1498.41