Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g2551 ATGCTTACTCCTGAAGGAGAAATAAAAATAAGTTTTGGCTATCAGTGCAACAATATTGAAAGAGGTGGCATCCCTTGTGAGGTGGCAAATCGCCACAACATCCTTCCTGAAGTCCGTAGGACAAGCAGTTTCTCATGCTTGTCAGGTGCGGCCTTAAGCGCAAACGCTACACTCGCCAACACAAACCTCTGCAATGGTAAGATAGGAGGTGAAATTCTTCCAAGTTGGGACTCTCCTAATTCATTTCGCAAGGTGCCCTCTTCACCAAGTCTTTCAAAGCTGGAAAGGCTATCATCTTCTCTGCCAAGTAGTTTATCTTACCTAAGTTGTAGTCCTTCCACCTCAAGTGATATACTAGAATATGACCCCTGCACATTCAAGTCCATGAGCGATCCTACCAGAACTGAAGGTTTTCTTAATGCTACCGAACTACAAGTGGCGGGAGGAGCTGCTGGTGAAGATAGAGTTCAAGCGGTATGTTCTGAAGAGAACGGATGGCTCTTTTGTGCAATTTATGATGGCTTTAATGGTAGAGATGCAGCTGACTTTCTGGCTGGTACACTCTATGATACCATCATATCTCACTTGAACAAGTTATTTTGGGAATTTGAGCCAGTTTCCATGGTAGAATCTGAAAATTTGATAAGTTTGGGTGGATCCCCTCAATATAACTTAGAGCAGAACCACAGCCTTATTTGTGATGCAGACCGATCCCTTTCACACAGGGTACTTGATAGCCTCCAATGTGCTCTTACTCAAGCTGAGAATGATTTCTTGTACATGGTTGAGCAGGAAATGGAGGATCGTCCAGATTTAGTTTCAATTGGATCTTGTGTTTTAGTTGTGCTTCTTCATGGTAATGATTTGTATACACTTAATCTAGGTGACAGCAGAGCAGTATTGGCAACATGCAGTCATGGCGATGGAAGACTCAAGGCTATCCAGCTTACTGATAGCCATACCGTCGACAATGAAGCCGAAAGAGCTACACTTGTAGCCAATCATCTTGATGATCCCAAGGTTGTTGTAGCAGGAAAGGTGAAAGGGAAGCTCAAGGTTACTCGCGCCTTTGGAGTCGGCTACTTGAAAAAAAGAAATCTCAATGATGCTTTGATGGGAATCCTTCGAGTGCGTGATCTAACAAGCCCTCCATATATTTCCACTCAACCATCACTGAATGTCCATAAAATCTCGAATTCTGATCAATTTGTTGTGGTAGGGAGTGATGGTTTATTCGACTTCTTCAGCAACGTTGAGGCAGTAAAGCTTGTTGAGTCTTATATCTTGAGCAACCCTTTGGGCGATCCAGCAAAGTTTCTCATAGAAGAGCTTGTAGCTAGAGCAGCTCATTCTGCAGGTTTGACCATGGAAGAGTTGATGAATATTCCTGCTGGAAGAAGAAGGAAGTACCATGATGATGTGACTGTAATGGTGATCATGCTTGGGATGAATCAGAGGACTTCCAAGGCATCAACTTGCATCTAA 1485 0.433 MLTPEGEIKISFGYQCNNIERGGIPCEVANRHNILPEVRRTSSFSCLSGAALSANATLANTNLCNGKIGGEILPSWDSPNSFRKVPSSPSLSKLERLSSSLPSSLSYLSCSPSTSSDILEYDPCTFKSMSDPTRTEGFLNATELQVAGGAAGEDRVQAVCSEENGWLFCAIYDGFNGRDAADFLAGTLYDTIISHLNKLFWEFEPVSMVESENLISLGGSPQYNLEQNHSLICDADRSLSHRVLDSLQCALTQAENDFLYMVEQEMEDRPDLVSIGSCVLVVLLHGNDLYTLNLGDSRAVLATCSHGDGRLKAIQLTDSHTVDNEAERATLVANHLDDPKVVVAGKVKGKLKVTRAFGVGYLKKRNLNDALMGILRVRDLTSPPYISTQPSLNVHKISNSDQFVVVGSDGLFDFFSNVEAVKLVESYILSNPLGDPAKFLIEELVARAAHSAGLTMEELMNIPAGRRRKYHDDVTVMVIMLGMNQRTSKASTCI* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g2551 494 SMART PP2C_4 129 479 IPR001932 -
Ahy11g2551 494 PANTHER PROTEIN PHOSPHATASE 2C 2 493 IPR015655 GO:0004722|GO:0006470
Ahy11g2551 494 Pfam Protein phosphatase 2C 161 447 IPR001932 -
Ahy11g2551 494 SUPERFAMILY PP2C-like 152 482 IPR036457 -
Ahy11g2551 494 Gene3D - 107 490 IPR036457 -
Ahy11g2551 494 ProSiteProfiles PPM-type phosphatase domain profile. 138 481 IPR001932 -
Ahy11g2551 494 CDD PP2Cc 151 479 IPR001932 -
Ahy11g2551 494 PANTHER PROTEIN PHOSPHATASE 2C 40-RELATED 2 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g2551 Ahy-Chr11 141464456 141467418 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g2551 4 494 PP2C-type Phosphatase Gene Family AT3G16560 64.600 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g2551 - - adu:107464162 829.706
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2551 11 141464456 141467418 Ahy1g2371 1 101755272 101758150 hybridization
Ahy11g2551 11 141464456 141467418 Ahy14g1066 14 18775979 18779681 PCT
Ahy11g2551 11 141464456 141467418 Ahy4g0969 4 18817745 18821448 PCT
Ahy14g1066 14 18775979 18779681 Ahy11g2551 11 141464456 141467418 PCT
Ahy4g0969 4 18817745 18821448 Ahy11g2551 11 141464456 141467418 PCT