Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g2524 ATGCTGGGATCTTGTCTCAAAAACCTGTTCTTGTACGACCTTACTGTCATCACAAGAACCCCATCAACCTCATTTCTGATCCCTTCACCTTCTTCCCCATTCCCTGCTCCCAATTACGCTACAGTCACAAAAACCCTGGAAAAACAATCCTTTACGGTGAATTACCTCGTGGAAAATTGTGGGTTCCTCCCAGATTCCGCTCTTCGTGCTTCCAAATACGTCCTTTTAAAGAGTCCCGAGAAACCCGACTCAGTCATCGCACTCTTCAGGAGCTTCGGTTTCACAGATTTGCAGTTTCACAATGTCATTCGGAGATCACCCAAGGTTCTCGTCAGCAAACCCAAAGAGACCATCTTGCCCAAGCTCGAGTTCCTCATCTCCAAAGGAGTCCGTGAGATAAGCATGTCATGGCTAATTCGCCAGTGGCCTTGCTTGCTTGTATTCAATTCTGAAGTTCGCCTCAAGAGTATAGTAGATGAAGTCATTAAAATGGGGGTTGATCCCAACAAGGCTAATTTTGTTGCTGCATTGTATGCTAAGTTTCTTCCAAAGTCCATGTGGGATAAGAAAGTTGAGTTGTACAAGAGTTTTGGATTAACTGATGACAACATTCGTGAGGCTTTTGTGAAGCACCCTTTCTGTATGCTGAAATCTGTGCAGAAAATTGAGGCCTGCGTTGGATTCTTTGTCAAAGAACTCGGTTGGGAGCCTGCTGAAGTAACCAATAATCCGGTTCTTCTCTCGCTGGATTTGGACAAAAGGATTGTTCCGAGGGCTGCTGTCATGAAGATTCTTATCTCCAATGGTGTCATTAAGAGTGGCAGGCATGCTTCTGCATATTTTGTTTCTGAAGAGGAGTTTTTTAAGAAGTATGTTAATCGTGACAAGGATCATGCTCCCGACTTATTGACGCTGTATAATGAGAAAATGAATCTTCCAGTAATGGATAGTAAATTGATGTCTTGA 966 0.4348 MLGSCLKNLFLYDLTVITRTPSTSFLIPSPSSPFPAPNYATVTKTLEKQSFTVNYLVENCGFLPDSALRASKYVLLKSPEKPDSVIALFRSFGFTDLQFHNVIRRSPKVLVSKPKETILPKLEFLISKGVREISMSWLIRQWPCLLVFNSEVRLKSIVDEVIKMGVDPNKANFVAALYAKFLPKSMWDKKVELYKSFGLTDDNIREAFVKHPFCMLKSVQKIEACVGFFVKELGWEPAEVTNNPVLLSLDLDKRIVPRAAVMKILISNGVIKSGRHASAYFVSEEEFFKKYVNRDKDHAPDLLTLYNEKMNLPVMDSKLMS* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g2524 321 Gene3D Transcription termination factor 3, mitochondrial 57 298 IPR038538 -
Ahy11g2524 321 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED 46 147 - -
Ahy11g2524 321 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED 140 312 - -
Ahy11g2524 321 PANTHER CGI-12 PROTEIN-RELATED 46 147 IPR003690 GO:0003690|GO:0006355
Ahy11g2524 321 PANTHER CGI-12 PROTEIN-RELATED 140 312 IPR003690 GO:0003690|GO:0006355
Ahy11g2524 321 Pfam mTERF 81 287 IPR003690 GO:0003690|GO:0006355
Ahy11g2524 321 SMART mt_12 136 167 IPR003690 GO:0003690|GO:0006355
Ahy11g2524 321 SMART mt_12 237 271 IPR003690 GO:0003690|GO:0006355
Ahy11g2524 321 SMART mt_12 205 236 IPR003690 GO:0003690|GO:0006355
Ahy11g2524 321 SMART mt_12 100 131 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g2524 Ahy-Chr11 141016351 141017855 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Ahy11g2524 mTERF 1.40E-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g2524 K15032 - pvy:116132216 171.4