Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g2492 ATGATGTGGTCTGCTCCTCGTTCTGCTTTATCCGCCATGGCCCTTGAGCCACCGCCCTCTCCCCAACCTTCCTCTGCCACCAGCAATGATGGATTGCAAAGCAAACAAAGAGAGCAGAATGAAGCAAAGCAGAGATCAATAATAAGGTCTCTAAGGAGGCTAACTGCGCTATCAACAGGTTCACTTCCAGATGTGGAACCTCCAAGAAGTGAGGATGTCTCTGTATCTAGTATGAAGAGTTGTCCGAGTCCAGGATCCGAAAGCTCCTCTTCCAACACCGGTAGCCCTTCTAATTCCGGGGAGCAGTCGGATTTAAAAGGCAACAATAACAATAAAATGAATGGCATTGTTAGTATTCTGAAGAAAGGATCCCAGATGCCCCTCTATACCTTAACCTCAATCAAGGAGGCTCCGTATTTCAAAAAGAGAACCTCCGCCGAACGAATCCCAGAGGAATTTTCTGCAATTCTTAAACAAGGATCATCTCTTAATCCTGAGGCTTATCGCTTTAAAGCGTCCTGGAAATTATTCACTCTCGCAGATCTCCAGGCCGCGACCAATAATTTCAGCCAGGAGAATTTGATCGGGCAGGGAGGTTATGGTGAGGTTTACAAAGGCCAATTGGCAGATGGAACCTTTGTAGCAATTAAAAGGCTAACAAGAGGGGACCAAGAAGAAATGACTGCAGATTTTTTGTCCGAGCTTGGGATTATAGTGCATGTGGACCACCCCAATATTGCTAAATTGATTGGATATGGAGTTGAAGGTGGAATGCATCTTGTTCTTCAGTTGTCTCCACATGGCAGCCTAGCTTCCATACTATATGGACCTAGAGAGAAACTGAATTGGAACATGAGGTATAAGATTGCATTGGGGACTGCTGAAGGCCTCCACTATCTGCATGCACAATGTCAAAGAAGGATTATTCACAGAGATATCAAGGCTGCTAATATATTGCTTTCAGAGGATTTTGAGCCACAGATAGCTGATTTTGGACTATCTAAATGGTTACCTGACAAATGGACTCACCATACTGTCTCCAAAGTAGAAGGCACATTCGGTTACCTTCCTCCTGAATACTTCATGCATGGTATTGTTGATGAAAAAACTGATGTATTTGCTTATGGAGTGCTATTATTGGAGCTCATTACCGGCCGTCCGGCTTTGGACAAAGCTCAGAAAAGTCTTGTGATGTGGGCAAAACCACTGATATCCAAGAGCAAAATGGACGAGCTTATTGATCCATGTCTTGCTGGTGCCTATGACGAAGAGCAGATGAAATATATAATCTTAACAGCTTCTTTGTGTATAGCGGAGTCGACCGTTCGACCGCGAATGCATCAGGTATTGCAGATAGCAAAAGGTGAAGAAGGCAGCATGGAGTTAGTTAGGGAACTCCTGGAACCTTTATGTGATGATGAGTTCCTTGAAGAAGAGTTTCCTTCACCTGAGAGTTCCAATGACATATCTAAACATTTGCAGACTATTGGACAAGATTAA 1500 0.4387 MMWSAPRSALSAMALEPPPSPQPSSATSNDGLQSKQREQNEAKQRSIIRSLRRLTALSTGSLPDVEPPRSEDVSVSSMKSCPSPGSESSSSNTGSPSNSGEQSDLKGNNNNKMNGIVSILKKGSQMPLYTLTSIKEAPYFKKRTSAERIPEEFSAILKQGSSLNPEAYRFKASWKLFTLADLQAATNNFSQENLIGQGGYGEVYKGQLADGTFVAIKRLTRGDQEEMTADFLSELGIIVHVDHPNIAKLIGYGVEGGMHLVLQLSPHGSLASILYGPREKLNWNMRYKIALGTAEGLHYLHAQCQRRIIHRDIKAANILLSEDFEPQIADFGLSKWLPDKWTHHTVSKVEGTFGYLPPEYFMHGIVDEKTDVFAYGVLLLELITGRPALDKAQKSLVMWAKPLISKSKMDELIDPCLAGAYDEEQMKYIILTASLCIAESTVRPRMHQVLQIAKGEEGSMELVRELLEPLCDDEFLEEEFPSPESSNDISKHLQTIGQD* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g2492 499 MobiDBLite consensus disorder prediction 478 499 - -
Ahy11g2492 499 MobiDBLite consensus disorder prediction 1 112 - -
Ahy11g2492 499 PANTHER RECEPTOR-LIKE CYTOSOLIC SERINE/THREONINE-PROTEIN KINASE RBK2 ISOFORM X1 74 463 - -
Ahy11g2492 499 SUPERFAMILY Protein kinase-like (PK-like) 170 452 IPR011009 -
Ahy11g2492 499 Pfam Protein kinase domain 190 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy11g2492 499 ProSitePatterns Serine/Threonine protein kinases active-site signature. 308 320 IPR008271 GO:0004672|GO:0006468
Ahy11g2492 499 Gene3D Transferase(Phosphotransferase) domain 1 266 465 - -
Ahy11g2492 499 PANTHER OS08G0249100 PROTEIN 74 463 - -
Ahy11g2492 499 SMART serkin_6 189 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy11g2492 499 MobiDBLite consensus disorder prediction 73 112 - -
Ahy11g2492 499 ProSiteProfiles Protein kinase domain profile. 189 463 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy11g2492 499 ProSitePatterns Protein kinases ATP-binding region signature. 195 217 IPR017441 GO:0005524
Ahy11g2492 499 Gene3D Phosphorylase Kinase; domain 1 154 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g2492 Ahy-Chr11 140507164 140509957 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g2492 172 468 Receptor kinase-like Gene Family AT4G02010 41.424 5.82e-70 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Ahy11g2492 Pkinase 4.30E-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g2492 - - lja:Lj6g3v1915960.1 536.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2492 11 140507164 140509957 Ahy11g2492 11 140507164 140509957 ECH
Ahy11g2492 11 140507164 140509957 Ahy16g0999 16 18050486 18057163 ECH
Ahy11g2492 11 140507164 140509957 Ahy16g0288 16 6266527 6268338 ECH
Ahy11g2492 11 140507164 140509957 Ahy12g2552 12 114742050 114748046 ECH