Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g2440 ATGGAGGTGACTCTGAGCGAGGAGGATGCTAATTGTGGAGGGAGTGAAGGTGATGGGTACGAGGATGAACTTTCTGAGTTGGAAGACCTTGCCGGACTAAGTGTGGATGACATCTTGAAGAAGGTATGGGACAGCATTGATAATGCATATGAGTTCTATCGAGGGTTCGGCAAACTGTATGGATTCGGGGTGCGAAAGGGTGACTCCGGAAAAGACTGTGAGGGGAATCTGGTAAGGTATAGGTTTTTTTGTAACAAGGAAGGCTCGAGGGAACGTAAATACTACGACAGGGTTGACAGAACGAGGGTACACAAACCGGAGATAAGAACTAACTACAAGACAATGTTATCGGTTTATTTAGACAAAAATGATAAGTATTGGAAGGTTAGGAAGTTAGTCACCAAACACAATCACGAGCTGACACCGGTAGGAATGGTGCACTTGATTGCCAATCATCGTGGGTTAACGGAAGTTGCAAAGAGTCAGATAGTTGGGATGCAAGCACATGGTATTGCAACGTCTAAGATTGTAAGGTACATGGCTGGTATGGCCGGTGGCTATTCGTTGTTGGGGTTCCTGAAGAAGGATGTCTATAACTATGCTGACAAACAGCGGCGTATTAAAATAGCTTATGGCGATGCAAATTCTGCATTAGTGTATCTAGAGGGAAAAACCGAATCAGACCCCATGGCAATCGCAAAATATAATGTGACTAGTGGCAACAGGCTCGCAAATCTGATCTGGGTGGACGGAACTAGCAGAGTCGATTACCAATCCTTTGGCGATGTATTGGCGTTCGATTCAACCTACAAGAAAAATAAATACAAGAGACCAGTTGTGATTTTTTCTGGAACAAACAATCATAAGCAGACCACTATATTCGGGTTCGGGTTGTTGCTTGATGAAAGTCTGGCATCCTATCAGTGGATGCTAGAGAATTTGATGGAGATCATGTGTGGTAAGAAGCCGTTTGTAGTGGTGACTGACGGGGACAAAGCTATGATAAAAGCAGTTTTTGAAGTCCTCCCCGAGTCGACGCATCGACTGTGTGCATGGCATGTGGAGAAGAACGTCACATCAAATGTAAAGGATGCTGATTTACGTGGGCTGTTTAGGAGATGGTTGTACGCGGATATGGCGACAGAGGACTTTGAATCGGAATGGGAGCAGGCCGCCGATGAGTATGGCCTCCACGAGAAGTAG 1203 0.4539 MEVTLSEEDANCGGSEGDGYEDELSELEDLAGLSVDDILKKVWDSIDNAYEFYRGFGKLYGFGVRKGDSGKDCEGNLVRYRFFCNKEGSRERKYYDRVDRTRVHKPEIRTNYKTMLSVYLDKNDKYWKVRKLVTKHNHELTPVGMVHLIANHRGLTEVAKSQIVGMQAHGIATSKIVRYMAGMAGGYSLLGFLKKDVYNYADKQRRIKIAYGDANSALVYLEGKTESDPMAIAKYNVTSGNRLANLIWVDGTSRVDYQSFGDVLAFDSTYKKNKYKRPVVIFSGTNNHKQTTIFGFGLLLDESLASYQWMLENLMEIMCGKKPFVVVTDGDKAMIKAVFEVLPESTHRLCAWHVEKNVTSNVKDADLRGLFRRWLYADMATEDFESEWEQAADEYGLHEK* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g2440 400 Pfam FAR1 DNA-binding domain 51 141 IPR004330 -
Ahy11g2440 400 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 37 390 IPR031052 GO:0006355
Ahy11g2440 400 Pfam MULE transposase domain 263 357 IPR018289 -
Ahy11g2440 400 PANTHER OS02G0262500 PROTEIN 37 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g2440 Ahy-Chr11 139306319 139312231 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy11g2440 MULE 4.70E-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g2440 - - aip:107620053 706.057