Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g2438 ATGATGATGATGATGATGAGTGTTAATAACTCGGTGTCATGTGGATGCAAGCCCCTACTCATGACCATGGAGTCCCTCTTCCACCACCGCATCACCACGAAGGAGAAGGTTGTGGTGGTCATTGGCGCCACCGGCACCGGCAAGTCCAAGCTAGCCATTGACATAGCCACTCACTTCAAACCGGCGGAGATTGTCAACTCCGACAAAATTCAAGTGTTCAAAGGCCTCGACATCACCACTAACAAGGTGACAGAGGAAGAGTCTCGTGGGGTCCCACACCACCTTCTTGGTTTCGTGGACGATGACGACTTCACAGCCACACAATTCTCTCACGAAGCAACCAGAGCCGTTGATTCAATCGTTCAGAGAAACGCTCTTCCCATCATTGCCGGTGGTTCTAACTCCTTCATTGACCACTTGGTCAACCACCATGACCACTTTCGTTTAAGGTACGACTGCTGCTTCCTCTGGGTCGACGTTTCTCTTCCCGTCCTCCATTCCTCTTTGGAACGCCGCGTTGACAAAATGATTCAGGCCGGTCAAGTCAACGAAGTTCGCGATTTCTTTGACCCTTCCGGAGACTACTCCAGAGGGATTCGGAGGGCCATTGGAGTCCCTGAGTTTCACCAATTTCTTAAAGCCGAGTCCATGGAAGCAGACCAGGAAACCAAGAACAGGCTTCTAGAAGACGCCATTGCCACCATCAAGCTCAACAACTGCAAGCTCGCCAACCGCCAGCTACACAAGATTCAGCGCCTCCACGCCGTGTGGAAGAGAAGCATGCACCGCCTCGACGCCACTCAGGCTTTTCTTAACACACAAGAAGCCGCTTGGGAGGATCACGTCGTGGCTAAAGCTAGAAGGATCGTGCAGAGGTTCTTGTACGACGAAACTCATCAACATGTTGTTCCGCCGCTTGTGTCCTCTCCAGCTTCGCCGCCAGCAGCCGCCATGGCCGCGGTAACACATTAG 972 0.5257 MMMMMMSVNNSVSCGCKPLLMTMESLFHHRITTKEKVVVVIGATGTGKSKLAIDIATHFKPAEIVNSDKIQVFKGLDITTNKVTEEESRGVPHHLLGFVDDDDFTATQFSHEATRAVDSIVQRNALPIIAGGSNSFIDHLVNHHDHFRLRYDCCFLWVDVSLPVLHSSLERRVDKMIQAGQVNEVRDFFDPSGDYSRGIRRAIGVPEFHQFLKAESMEADQETKNRLLEDAIATIKLNNCKLANRQLHKIQRLHAVWKRSMHRLDATQAFLNTQEAAWEDHVVAKARRIVQRFLYDETHQHVVPPLVSSPASPPAAAMAAVTH* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g2438 323 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 25 301 IPR039657 -
Ahy11g2438 323 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 162 261 - -
Ahy11g2438 323 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 38 149 IPR027417 -
Ahy11g2438 323 Pfam IPP transferase 148 248 - -
Ahy11g2438 323 Pfam IPP transferase 71 144 - -
Ahy11g2438 323 Gene3D - 34 294 IPR027417 -
Ahy11g2438 323 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 5, CHLOROPLASTIC 25 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g2438 Ahy-Chr11 139238442 139240137 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g2438 150 304 C2H2 Transcription Factor Family AT2G27760 34.807 7.45e-24 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g2438 K10760 - gmx:100812928 386.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2438 11 139238442 139240137 Ahy11g2438 11 139238442 139240137 ECH
Ahy11g2438 11 139238442 139240137 Ahy1g2473 1 103112564 103114150 hybridization
Ahy11g2438 11 139238442 139240137 Ahy14g0405 14 5337860 5339908 PCT
Ahy11g2438 11 139238442 139240137 Ahy4g0321 4 3995332 3997755 PCT
Ahy14g0405 14 5337860 5339908 Ahy11g2438 11 139238442 139240137 PCT
Ahy4g0321 4 3995332 3997755 Ahy11g2438 11 139238442 139240137 PCT