Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g2427 ATGGGGAAGGGGAAGGGGAAGGGGAAGAGGGGAGGGGAGACGGAAGCGGCGGCAACACATGGTAAAGATGCTAATGGTGGTGGTAAAGGTGCTGGTGGTGGTGGAGGACTGAGGAAGCTTCTATACGGTGAAGAGGAAGGGGATAATCGACCGGTGATCGGAACAGTCGCCGCCGGTTCCGGCGAGCTAAAATTTTTTGTGTCGGAGAGTGGAAAATTGAATAGCCTCGAAGAGGTTGATTCAGTTGTTGAAGAAGAACATTCGGAGAAATGTGTGGGAGAATGGTTGCTTGATTCGTTTTTTGCAGTGAAAATATATGGGAAATGTTGTGATTTTTGGTTTCAGATACATGAAGAGGCTAGGAAGTTTGCATATCAAACAGGGGTTAAGGTGGTTATTGCTTATGGCGGAGCTCCAATAAACCATCAGCTACGAGATCTTGAGAAGGGGGTGGACATTCTCGTCGCAACTCCTGGAAGACTGGTAGATTTGCTGGAGAGAGCTAGAGTTTCACTTCAGATGATCAGATATATTGCACTAGATGAGGCAGATAAGATGCTGGATATGGGTTTTGAGCCACAAATAAGGAAGATTGTTGAACAAATGGATATGCCCCCTCCAGATGTAAGACAGACTATGCTATTCAGTGCCACATTTTCTAAAAAGATACAGGTTTAG 678 0.4572 MGKGKGKGKRGGETEAAATHGKDANGGGKGAGGGGGLRKLLYGEEEGDNRPVIGTVAAGSGELKFFVSESGKLNSLEEVDSVVEEEHSEKCVGEWLLDSFFAVKIYGKCCDFWFQIHEEARKFAYQTGVKVVIAYGGAPINHQLRDLEKGVDILVATPGRLVDLLERARVSLQMIRYIALDEADKMLDMGFEPQIRKIVEQMDMPPPDVRQTMLFSATFSKKIQV* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g2427 225 Gene3D - 113 225 IPR027417 -
Ahy11g2427 225 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 115 225 IPR014001 -
Ahy11g2427 225 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 112 224 - -
Ahy11g2427 225 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 52C 112 224 - -
Ahy11g2427 225 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 114 223 IPR027417 -
Ahy11g2427 225 MobiDBLite consensus disorder prediction 1 17 - -
Ahy11g2427 225 Pfam DEAD/DEAH box helicase 115 223 IPR011545 GO:0003676|GO:0005524
Ahy11g2427 225 SMART ultradead3 81 225 IPR014001 -
Ahy11g2427 225 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g2427 Ahy-Chr11 139078939 139083518 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g2427 115 218 Eukaryotic Initiation Factors Gene Family AT3G13920 39.423 1.57e-13 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g2427 K11594 - ahf:112721994 392.889