Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g2423 ATGGCGAGCAAGGATGTTAAGTTCCCTCCTCAGAGCCAGGACACTCAGCCAGGGAAAGAGTATATAATGAATCCGATTCCTCAAGCCATAAGTCCAGACTACAAGCCCTCCAACAAGCTCCGGGGTAAGGTGGCTTTGGTGACAGGAGGTGATTCTGGGATAGGCAGAGCAGTGTGTGTGTGTTTTGCAAAAGAGGGTGCAACCGTTGCATTTACATACGTTAAGGGCCACGAGGACAAGGACAAGGATGACACACTTAAGATGCTGCTAGAATCCAAGACAAGTGATGCACAAGATCCTTTGGCAATAGCTGCGGATATTGGATTTGATGAGAACTGCAAGCAGGTTGTTGATTATGTTGTCCAAGAATATGGACGCATTGATATTCTAGTTAACAATGCGGCCGAGCAGCACTTGACTAAATCGGTCGAGGAAATCACCCAAGATCAACTAGAAAGAGTCTTCAAGACCAATATGTTTTCGCAGTTCTACTTGGTCAGGCATGCACTGAATCACATGAAAGAAGGGAGTTCCATTATCAACTCAACCTCAGTTAATGCCTACAGTGGAAGTCCTCAAGCACTGGACTATACCGCAACGAAGGGAGCCATTGTGGCCTTCACAAGAGGGCTTGCTCAGATGCTGGTGAGTAAGGGGATTCGGGTGAATGCGGTGGCGCCAGGTCCGGTTTGGACGCCAATACAACCAGCTTCCATGCCTGCCGAGATGATTCAGAGTTTAGGGTCAGAGGTGCCAATGAAGCGAGCAGCTCAACCATCGGAGATTGCACCCTGTTATTTGTTCTTGGCATCCCTTCAGGACTCTTCTTATTTTAGTGGCCAAGTTCTCCATCCAAATGGTGGAGTGATCGTCAATGCTTAG 882 0.4796 MASKDVKFPPQSQDTQPGKEYIMNPIPQAISPDYKPSNKLRGKVALVTGGDSGIGRAVCVCFAKEGATVAFTYVKGHEDKDKDDTLKMLLESKTSDAQDPLAIAADIGFDENCKQVVDYVVQEYGRIDILVNNAAEQHLTKSVEEITQDQLERVFKTNMFSQFYLVRHALNHMKEGSSIINSTSVNAYSGSPQALDYTATKGAIVAFTRGLAQMLVSKGIRVNAVAPGPVWTPIQPASMPAEMIQSLGSEVPMKRAAQPSEIAPCYLFLASLQDSSYFSGQVLHPNGGVIVNA* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g2423 293 PANTHER NADPH-DEPENDENT ALDEHYDE REDUCTASE-LIKE PROTEIN, CHLOROPLASTIC-RELATED 1 293 - -
Ahy11g2423 293 PANTHER SHORT-CHAIN DEHYDROGENASE/REDUCTASE SDR-RELATED 1 293 - -
Ahy11g2423 293 PRINTS Glucose/ribitol dehydrogenase family signature 44 61 IPR002347 -
Ahy11g2423 293 PRINTS Glucose/ribitol dehydrogenase family signature 171 187 IPR002347 -
Ahy11g2423 293 PRINTS Glucose/ribitol dehydrogenase family signature 125 136 IPR002347 -
Ahy11g2423 293 PRINTS Glucose/ribitol dehydrogenase family signature 197 216 IPR002347 -
Ahy11g2423 293 PRINTS Glucose/ribitol dehydrogenase family signature 218 235 IPR002347 -
Ahy11g2423 293 PRINTS Glucose/ribitol dehydrogenase family signature 252 272 IPR002347 -
Ahy11g2423 293 CDD SDR_c1 17 292 - -
Ahy11g2423 293 MobiDBLite consensus disorder prediction 1 19 - -
Ahy11g2423 293 Gene3D - 2 290 - -
Ahy11g2423 293 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 197 216 IPR002347 -
Ahy11g2423 293 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 177 185 IPR002347 -
Ahy11g2423 293 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 136 IPR002347 -
Ahy11g2423 293 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 41 290 IPR036291 -
Ahy11g2423 293 MobiDBLite consensus disorder prediction 1 22 - -
Ahy11g2423 293 Pfam Enoyl-(Acyl carrier protein) reductase 52 289 - -
Ahy11g2423 293 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 184 212 IPR020904 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g2423 Ahy-Chr11 139044030 139045738 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g2423 33 289 Miscellaneous Gene Families AT4G05530 30.769 1.40e-26 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g2423 - - ahf:112763379 559.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2423 11 139044030 139045738 Ahy1g2486 1 103273838 103281015 hybridization