Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g2412 ATGAGCCCAAATCCTTCCACAAATCAGCCACCTCCAACCCCAACCACCTCATGTGCCCCTGACTCCCTCTTCCACCACCACCTACTCTGCCCCTCCTCTCCTTGCCCCATCTTCCTCCCTCTCTACCTCTGCCCTTTTCTTCTTCCTTCGTCCTTTTTTCTTTCCATTCTTCTTCCTCGGTCCCTGCCTCCATCACCGCCGCACAGCCGCGCCTCCGTCAGCCACCATCAACGCCGACGACCTCCTCCTTCCTCTCGCACCAGCACCGCTTCCAGCAATAACCCATCCGGTGAGGCGGATCCAAATTCCTGCGGCGGAGACACTGTCACCGGCCAGAATCGCAAGTTCTGTCCGCTGCCACTTACGCCGCGATTGCAGCAGAGTTCCAAGTCCCGGTCGAGCCTGCCGCCCCTCCAGCCGCTTTCGATAGCCCGGCGGAGCCTCGATGAGTGGCCGCAGGCGAGCTCAGATGACATTGGGGAGTGGTTGCCCCCACAGCCGCCGTTGACCACCGGTGGCGCCATGAGAGGTAACCCTGGTGAAAGGTTGAAACTTGATCTCTCCTCAATTCAGATGAACAATGATAGGAATTGCAATAATGGCAGTAATAGTAGTGGTAATAATAATAGTTGTAACAATAATGGTGTTAGTGGACTCTTGAAGAGGGATAGAATTGCATTTTTTGATAAGGAGTGTTCAAAGGTTGCTGAACATGTTTACCTTGGTGGTGATGCTGTTGCTAAGAATAGGGATATATTGAAACAGAATGGAATCACTCATATCTTGAACTGTGTTGGTTTTGTGTGCCCCGAGTATTTTAAGGCTGATTTTGTGTATAGAACATTGTGGCTTCAGGATAGTCCTTCAGAGGATATTACTAGTATCTTGTATGATGTGTTTGATTACTTTGAGGATGTTATGGAACAAGGTGGTAGGGTGTTTGTGCACTATTGTCAAGGTGTGTCTAGGTCTACTTCGTTGGTGATTGCATACCTCATGTGGAGAGAAGGACAGAGCTTTGATGATGCTTTTCAGTTGGTGAAGGCTGCAAGGGGTATTGCCGATCCGAATATGGGGTTTGTTTGCCAGTTGTTGCAGTGCCAGAAGAGGGTGCATGCAGTTCCTCTTAGTCCTACCTCTTTGCTTAGGATGTATAGGAAGGCTCCACACTCGCCTTATGATCCTTTGCATCTCGTCCCCAAAATGTTAACGGATCCTTCGCCTTCCGCATTGGACTCCAGGGGAGCTTTTTTTGTACATATTCCCACTGCAATATTTGTTTGTGATTAGAGGAAAGTGGGCTGCTATGATGTTGATTATGAAGTTTTTCAAAAAGCTATTGTTGGAGGTTTTGTGCCACCATTTCCATCATCAGAGGATAAACATGAAACCCATCTTCTTGCAAGAGAGAGTAGTTGGAGTGCCTTAAGGCGTAAAGTTTTCTCTTCTCATATGAAGGAGATTGTCACAGCCCCTAAGTCATCCCTCTCAAGGATTTATTCCGATTTCATGTTGTGTATTCATTCAACAAAAACTTCATCTCCATCCTCATCATCTATATCATCATCTTCGCCCTCGTATCATCATCTAATGGGAGTAAGGGAGTGA 1608 0.477 MSPNPSTNQPPPTPTTSCAPDSLFHHHLLCPSSPCPIFLPLYLCPFLLPSSFFLSILLPRSLPPSPPHSRASVSHHQRRRPPPSSRTSTASSNNPSGEADPNSCGGDTVTGQNRKFCPLPLTPRLQQSSKSRSSLPPLQPLSIARRSLDEWPQASSDDIGEWLPPQPPLTTGGAMRGNPGERLKLDLSSIQMNNDRNCNNGSNSSGNNNSCNNNGVSGLLKRDRIAFFDKECSKVAEHVYLGGDAVAKNRDILKQNGITHILNCVGFVCPEYFKADFVYRTLWLQDSPSEDITSILYDVFDYFEDVMEQGGRVFVHYCQGVSRSTSLVIAYLMWREGQSFDDAFQLVKAARGIADPNMGFVCQLLQCQKRVHAVPLSPTSLLRMYRKAPHSPYDPLHLVPKMLTDPSPSALDSRGAFFVHIPTAIFVCD*RKVGCYDVDYEVFQKAIVGGFVPPFPSSEDKHETHLLARESSWSALRRKVFSSHMKEIVTAPKSSLSRIYSDFMLCIHSTKTSSPSSSSISSSSPSYHHLMGVRE* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g2412 534 MobiDBLite consensus disorder prediction 122 139 - -
Ahy11g2412 534 PANTHER MKPA PROTEIN 429 523 - -
Ahy11g2412 534 MobiDBLite consensus disorder prediction 64 139 - -
Ahy11g2412 534 SMART dsp_5 231 370 IPR020422 GO:0006470|GO:0008138
Ahy11g2412 534 PANTHER MKPA PROTEIN 84 427 - -
Ahy11g2412 534 PANTHER PROTEIN-TYROSINE-PHOSPHATASE MKP1 84 427 - -
Ahy11g2412 534 PANTHER PROTEIN-TYROSINE-PHOSPHATASE MKP1 429 523 - -
Ahy11g2412 534 Gene3D Protein tyrosine phosphatase superfamily 206 373 IPR029021 -
Ahy11g2412 534 ProSiteProfiles Dual specificity protein phosphatase domain profile. 231 373 IPR020422 GO:0006470|GO:0008138
Ahy11g2412 534 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 290 351 IPR000387 GO:0016311|GO:0016791
Ahy11g2412 534 CDD DSP 232 366 - -
Ahy11g2412 534 Coils Coil 529 534 - -
Ahy11g2412 534 MobiDBLite consensus disorder prediction 511 534 - -
Ahy11g2412 534 MobiDBLite consensus disorder prediction 153 181 - -
Ahy11g2412 534 MobiDBLite consensus disorder prediction 511 527 - -
Ahy11g2412 534 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 223 372 IPR029021 -
Ahy11g2412 534 Pfam Dual specificity phosphatase, catalytic domain 239 369 IPR000340 GO:0008138|GO:0016311
Ahy11g2412 534 MobiDBLite consensus disorder prediction 83 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g2412 Ahy-Chr11 138942122 138943730 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g2412 88 267 Protein tyrosine phosphatase (PTP) family AT3G55270 51.381 1.49e-45 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g2412 - - aip:107613560 684.871