Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g2411 ATGAAAATGAAGTCCCTCTTATATCCGACCCTGTTGTCATTGCTGCTTTGGCACGTGGCGGTGGTATCAGCTGCAAGGCTGAACATGGCTAGCGATGAATCGGCCTTGGTTGCCATGAGGGAGCATTTTAACTCCTTGGATCCCAACAATGTGCTCGCAAGCAACTGGTCCAGCAGTACCTCTGTTTGCAACTGGATTGGCCTCACCTGCGGCTCTTCCCACCGCAGAGTAACTGCCTTGAATCTCTCATACATGTCTCTTGATGCCACCATCCCTCCGCATCTTGGAAACCTGTCATTCCTTTCTCGCCTGCATCTTCCCAACAATAGCTTCCACGGTAATCTACCTGCTGAACTTGCTGGATTACGTAGTCTGAGCATCATCAACCTTAGATTCAACAAATTCACTGGAAGTATCCCCTCCTGGTTTGAATCTCTACGGAAACTAAAACACCTGTTACTGGCAGGCAATAGTTTCACTGGCACAGTCCCACACTTCCTGTTCAACATGAGTTCCCTGCAATCGCTTGAACTTCTTGAAAACAAGTTTTGGGGTCCCTTACCTTCCAACATTTTCTTGTCTCCTTCTTTGCAATATCTGTATCTTACTTACAACCAAATTTCAGGAGCTATCCCTTCAGCTATCATCAACAGTTCGTTACTGCAGGTTATTGACCTCGACTACAACAACCTATCCGGACAACTGCCGGAGCGCATCTTCCACCATCTTCCAAACTTGAAAGAGCTTCACGTGACTAGTAATACCTTATCCGGTGAACTTCCACGCAGTTTGTTCAATTGCAAGCAACTGCAATATTTATCCTTATCCTACAACACCTTCGGTGGAAACATACCATCTTCCATCGGGAATTTAACAAGCCTCAATGAGATCTATCTTGGCTATAACAATTTCAGAGGTGCGATACCAAATGAAATTGGTAATCTACGTAGTTTAGAGATTCTGAGTCTTCCTTTCGCCAATGTAAGTGGCTACATTCCGCCATCAATCTTTAATATTTCTACCCTACGGGTAATTACTGTTAGTAGAAATCATTTATCAGGCAGCCTCCCAGCAAGCCTAGGCTACATGCTTCCAAAACTTGTTGAGCTGTACATGGGGATTAATTATCTCAGTGGAAGAATCCCAAGCTCCTTGTGCAATGCCACTATGCTTAATAACATAGATTTGGCTTACAATTCATTTTCTGGATACATTCCAGACATTTTTGGCAGCTTAAGAAGTCTCCAGCTGCTCAATCTTGGAAAAAATAATTTGACAAGTGATTCAGAGCTAAGCATTATAAATTCTTTGACAAATTGTAGATTTCTCAAAAAGTTGATATTTTCTGGAAATCCATTGGATTCTATTCTTCCAATATCGGTAGGAAACCTTTCTACTTCTCTGGTTGACTTGAAACTTCGGGGTTGTTCAATGAGAGGCACCATTCCAGCAAGTATTGGCAACTTGAGCAGCTTGATAAACCTTGACCTTGGTACTAATAATTTTGTTGGAACCTTTCCTACTAGCATAGGGAAATTAATAAAGCTACAAGGCTTCTATTTACATGACAACCAATTGGAAGGATTTGTTCCGAATCAATTGTGTCAACTAACGAGCTTGTATCAATTTTCCCTTAAAAGAAACAAATTCTCTGGCCCTATACCTTCTTGCATAAGCAATCTTACCTCATTGAGATGGCTTTGGCTTGCTTCAAATAAATTCAACTCAATACCTTCCACCGTGTGGAAGCTGTTCGATTTATTGCTTTTAGACTTATCTTCCAATAATTTAAGTGGATATCTCCCATTAGATAGTGGAAATCTAAAAGCCATAAGTTGGATTTATTTATCAGGAAATCAATTTTCAGGTAGCATCCCAAGAAGCCTCAGCAATCTTATGAATTTGGTTCATCTTACCTTAGCAAGAAACAAATTTGAAGGGCCCATCCCAGAATCATTTGGTCGTATGGTAAGTTTGGAACAACTTGACTTATCAGAAAATAACTTGTCTGGTGTCATTCCGAAAACATTGGAGGCACTTGTGTATCTGAAATATTTCAATGTTTCTCACAATAAGTTAAAAGGAAAAATCCCGGATGGGGGACCTTTTGCAAACTTCTCAGCTCAGTCGTTCATGGGGAATAAAGGATTATGTGGTGCTCCACGTTTCCATTTTTCGGAGTGTAAAATTGAAAAATCCCGAAAATGGAATGCACATATTGTGTTGACATATATTTTACCTGCAGCAATAGTTGCCACCCTTCTTGTGGCATTCCTTTGCATCCTAAAATTCCGGAAGCACAAGGTGGTCAACAATTCAGAGGTGGATCAATCGGGAGCAAGATGGAGAAGAATATCATACTATGAAATTCGGCAAGCATCAGATAGGTTCCATGATGGCAACTTGCTTGGTGTAGGGAGTTTTGGAAGAGTGTATAAAGGAGTACTCTCAGATGGGACGAATGTTGCAGTGAAAGTGTTTAATCTGGGGCTGGAAGGAGCATTTAGGAGTTTTGATGCTGAATGTGAGATATTGCGCAGTGTCCGCCATCGAAACTTAACCAAAATCATTAGCAGCTGCAGCAACATGGACTTCAAGGCATTGATCCTAAGCTACATGCCTAATGGGAGTTTAGAGAGGTGGCTACACTCGGAACACCATGGCTTGAGTATGATCCAGAGGCTAAACATAATGATAGATGTTGCAGAAGCAATGGATTACCTGCATAATGGTGGTTCTGTACCAATTATACACTGTGATTTGAAACCCAGCAACATATTACTAGATGAAGACATGGTTGCCCACGTGACTGATTTTGGCATTGCAAAATTGCTGAGTGGGGATGACTCCATCACTCAAACCATGAATCTAGCCACAATAGGCTATATGGCCCCTGAATATGGACTTGAGGGAAGAGTGTCTAGGCAAGGTGATGTGTATAGCTATGGAATTTTACTTATGGAGACCTTCACACAGAAAAAACCCACTGATGAAATGTTTGTGGGAGAGTTTAGCATCAAAGAGTGGGTGAAAATGTCGTGCCCTAATTCACTACTTGATATCGTTGATGCAAAATTATTGGTGGAAGAAGGAGAAACAGATACTAAACAGGACTGCTTGTTGTCTATAATGACTTTAGCTCTGAATTGCTCAGCTGAGTCTCCGGGTGAAAGGACAAGAATGAAAGACGCTATGAATGCTCTTAAAAAGATTAAAAGATTACTCTTGAACTAA 3234 0.4119 MKMKSLLYPTLLSLLLWHVAVVSAARLNMASDESALVAMREHFNSLDPNNVLASNWSSSTSVCNWIGLTCGSSHRRVTALNLSYMSLDATIPPHLGNLSFLSRLHLPNNSFHGNLPAELAGLRSLSIINLRFNKFTGSIPSWFESLRKLKHLLLAGNSFTGTVPHFLFNMSSLQSLELLENKFWGPLPSNIFLSPSLQYLYLTYNQISGAIPSAIINSSLLQVIDLDYNNLSGQLPERIFHHLPNLKELHVTSNTLSGELPRSLFNCKQLQYLSLSYNTFGGNIPSSIGNLTSLNEIYLGYNNFRGAIPNEIGNLRSLEILSLPFANVSGYIPPSIFNISTLRVITVSRNHLSGSLPASLGYMLPKLVELYMGINYLSGRIPSSLCNATMLNNIDLAYNSFSGYIPDIFGSLRSLQLLNLGKNNLTSDSELSIINSLTNCRFLKKLIFSGNPLDSILPISVGNLSTSLVDLKLRGCSMRGTIPASIGNLSSLINLDLGTNNFVGTFPTSIGKLIKLQGFYLHDNQLEGFVPNQLCQLTSLYQFSLKRNKFSGPIPSCISNLTSLRWLWLASNKFNSIPSTVWKLFDLLLLDLSSNNLSGYLPLDSGNLKAISWIYLSGNQFSGSIPRSLSNLMNLVHLTLARNKFEGPIPESFGRMVSLEQLDLSENNLSGVIPKTLEALVYLKYFNVSHNKLKGKIPDGGPFANFSAQSFMGNKGLCGAPRFHFSECKIEKSRKWNAHIVLTYILPAAIVATLLVAFLCILKFRKHKVVNNSEVDQSGARWRRISYYEIRQASDRFHDGNLLGVGSFGRVYKGVLSDGTNVAVKVFNLGLEGAFRSFDAECEILRSVRHRNLTKIISSCSNMDFKALILSYMPNGSLERWLHSEHHGLSMIQRLNIMIDVAEAMDYLHNGGSVPIIHCDLKPSNILLDEDMVAHVTDFGIAKLLSGDDSITQTMNLATIGYMAPEYGLEGRVSRQGDVYSYGILLMETFTQKKPTDEMFVGEFSIKEWVKMSCPNSLLDIVDAKLLVEEGETDTKQDCLLSIMTLALNCSAESPGERTRMKDAMNALKKIKRLLLN* 1078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g2411 1077 SMART serkin_6 797 1075 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy11g2411 1077 Gene3D Ribonuclease Inhibitor 143 193 IPR032675 -
Ahy11g2411 1077 Gene3D Ribonuclease Inhibitor 31 142 IPR032675 -
Ahy11g2411 1077 SUPERFAMILY RNI-like 80 387 - -
Ahy11g2411 1077 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 147 286 - -
Ahy11g2411 1077 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 267 1072 - -
Ahy11g2411 1077 Coils Coil 1061 1077 - -
Ahy11g2411 1077 SMART LRR_typ_2 243 267 IPR003591 -
Ahy11g2411 1077 SMART LRR_typ_2 513 537 IPR003591 -
Ahy11g2411 1077 SMART LRR_typ_2 291 315 IPR003591 -
Ahy11g2411 1077 SMART LRR_typ_2 122 145 IPR003591 -
Ahy11g2411 1077 SMART LRR_typ_2 412 435 IPR003591 -
Ahy11g2411 1077 SMART LRR_typ_2 561 584 IPR003591 -
Ahy11g2411 1077 SMART LRR_typ_2 195 218 IPR003591 -
Ahy11g2411 1077 SMART LRR_typ_2 364 388 IPR003591 -
Ahy11g2411 1077 SMART LRR_typ_2 656 679 IPR003591 -
Ahy11g2411 1077 SMART LRR_typ_2 146 170 IPR003591 -
Ahy11g2411 1077 SMART LRR_typ_2 219 242 IPR003591 -
Ahy11g2411 1077 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 6 148 - -
Ahy11g2411 1077 Gene3D Transferase(Phosphotransferase) domain 1 873 1075 - -
Ahy11g2411 1077 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 267 1072 - -
Ahy11g2411 1077 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 6 148 - -
Ahy11g2411 1077 ProSitePatterns Protein kinases ATP-binding region signature. 803 825 IPR017441 GO:0005524
Ahy11g2411 1077 ProSiteProfiles Protein kinase domain profile. 797 1075 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy11g2411 1077 SUPERFAMILY RNI-like 346 698 - -
Ahy11g2411 1077 Pfam Leucine rich repeat N-terminal domain 30 70 IPR013210 -
Ahy11g2411 1077 Pfam Leucine rich repeat 634 693 IPR001611 GO:0005515
Ahy11g2411 1077 Pfam Leucine rich repeat 123 182 IPR001611 GO:0005515
Ahy11g2411 1077 Pfam Leucine rich repeat 221 278 IPR001611 GO:0005515
Ahy11g2411 1077 SUPERFAMILY Protein kinase-like (PK-like) 773 1068 IPR011009 -
Ahy11g2411 1077 Gene3D Phosphorylase Kinase; domain 1 767 872 - -
Ahy11g2411 1077 Gene3D Ribonuclease Inhibitor 430 737 IPR032675 -
Ahy11g2411 1077 Gene3D Ribonuclease Inhibitor 194 429 IPR032675 -
Ahy11g2411 1077 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 147 286 - -
Ahy11g2411 1077 ProSitePatterns Serine/Threonine protein kinases active-site signature. 916 928 IPR008271 GO:0004672|GO:0006468
Ahy11g2411 1077 Pfam Protein kinase domain 797 999 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g2411 Ahy-Chr11 138937918 138941674 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g2411 31 625 Receptor kinase-like Gene Family AT3G47570 31.613 7.82e-70 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Ahy11g2411 Pkinase 5.30E-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g2411 - K13420 aip:107613554 1958.34