LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy11g2407	ATGAGCCATAATCCTTCCACAGATCAGCCACCTCCAACTCCAACCACCTCATGTGCCCCTGACTCCCTCTTCCACCACCACCTACGCTGCCCCTCCTCTCCTTGCCCTATTTTCCTCCCTCTCTACCTCTGTCATTTTCTTCTTCCTTCGTCCTTTTTCCCTTCCATTCTTCTTCCTCGGCCCCTGCTTCCATCACCGCCGCACAGCCGCGCTTCCGTCAGCCACCATCAACGCCGGCGACCTCCTCCTTCCTCTCGCACTAGCACCGCTTCCAGCAATAACCCATCCGGTGAGGCGGATCCAAATTCTTGCGGCGGAGACACTGTCACCGGCCAGAATCGCAAGTTCTGTCCGCCGTCACTTACGCCGCGATTGCAACAGAGTTCCAAGTCCCGGTCGAGCCTGCCGCCCCTCCAGCCGCTTTTGATAGCCCGGCGGAGCCTCGATGAGTGGCCGCAAGCGAGATCAGATGACATTGGGGAGTGGTTGCCCCCACAGCCGCCGTTGACCCTCGGTGGCGGCATGAGAGGTAATCCTGGTGAAAGATTGAATCTTGATCTCTCCTCAATTCAGATGAACAATAATAGGAATTGCAATAATGGCAGTAATAGTAGTGGTAATAATAATAGTTGTAACAATAATGGTGTTAGTAGACTCTTGAAGAGGGATAGAATTGTATTTTTTGATAAGGAGTGTTCAAAGGTTGCTGAACATGTTTACCTTGGTGGTGATGCTGTTGCTAAGAATAGGGATATATTGAAACAGAATGGGATCACTCATATCTTGAACTGTGTTGGTTTTGTGTGCTCCGAATATTTTAAGGCTGATTTTGTGTATAGAACATTGTGGCTTCAGGATAGTCCTTCAGAGGATATTACTAGTATCTTATATGATGTGTTTGATTACTTTGAGGATGTTAGGAAACAAGGTGGTAGGGTGTTTGTGCACTGTTGTCAAGGTGTGTCTAGGTCTACTTCGTTGGTGATTGCATACCTCATGTGGAGGGAAGAACAGAGCTTTGATGATGCTTTTCAGTTGGTGAAGGCTGTAAGGGGTATTGTCGATCTAAATATGGGGTTTGTTTGCCAGTTGTTGCAGTGCCAGAAGAGGGTGCATGCAGTTCCTCTTAGTCCTACCTCTTTGCTTAGGATGTATAGGATGACTCCACACTCGCCTTATGATCCTTTGCATCTCATCCCCAAAATGTTAACGGATCCTTCGTCTTCCGTATTGGACTCCAGGGGAGCTTTTTTTGTACATATTCCCACTGCAATATTTGTTTGTGATTAGAGGAAAGTGGGCTGCTATGATGTTGATTATGAAGTTTTCCAAAAAGCTATTGTTGGAGGTTTTGTGCCACCATTTCCATCATCAGAGGATGAACATGAAACCCATCTTCCTGCAAGAGAGAGTAGTTGGAGTGCCTTAAGGCGTAAAGTTTCCTCTTCTCATATGAAGGAGATTGTCACAGCCCATAAGTCATCCCTCCCAAGGGTTTATTCCGATTCCATGTTGTGTATTCATTCAACAAAAACTTCATCTCCATCCTCATCATCTATATCATCATCTTCGCCCTCGTATCATCATCTAATGGGAGTAAGGGAGTGA	1608	0.467	MSHNPSTDQPPPTPTTSCAPDSLFHHHLRCPSSPCPIFLPLYLCHFLLPSSFFPSILLPRPLLPSPPHSRASVSHHQRRRPPPSSRTSTASSNNPSGEADPNSCGGDTVTGQNRKFCPPSLTPRLQQSSKSRSSLPPLQPLLIARRSLDEWPQARSDDIGEWLPPQPPLTLGGGMRGNPGERLNLDLSSIQMNNNRNCNNGSNSSGNNNSCNNNGVSRLLKRDRIVFFDKECSKVAEHVYLGGDAVAKNRDILKQNGITHILNCVGFVCSEYFKADFVYRTLWLQDSPSEDITSILYDVFDYFEDVRKQGGRVFVHCCQGVSRSTSLVIAYLMWREEQSFDDAFQLVKAVRGIVDLNMGFVCQLLQCQKRVHAVPLSPTSLLRMYRMTPHSPYDPLHLIPKMLTDPSSSVLDSRGAFFVHIPTAIFVCDRKVGCYDVDYEVFQKAIVGGFVPPFPSSEDEHETHLPARESSWSALRRKVSSSHMKEIVTAHKSSLPRVYSDSMLCIHSTKTSSPSSSSISSSSPSYHHLMGVRE	536

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy11g2407	534	ProSiteProfiles	Tyrosine specific protein phosphatases domain profile.	290	351	IPR000387	GO:0016311\|GO:0016791
	Ahy11g2407	534	PANTHER	MKPA PROTEIN	429	523	-	-
	Ahy11g2407	534	PANTHER	PROTEIN-TYROSINE-PHOSPHATASE MKP1	84	427	-	-
	Ahy11g2407	534	MobiDBLite	consensus disorder prediction	66	138	-	-
	Ahy11g2407	534	Gene3D	Protein tyrosine phosphatase superfamily	201	373	IPR029021	-
	Ahy11g2407	534	MobiDBLite	consensus disorder prediction	83	136	-	-
	Ahy11g2407	534	SMART	dsp_5	231	370	IPR020422	GO:0006470\|GO:0008138
	Ahy11g2407	534	MobiDBLite	consensus disorder prediction	510	534	-	-
	Ahy11g2407	534	ProSiteProfiles	Dual specificity protein phosphatase domain profile.	231	373	IPR020422	GO:0006470\|GO:0008138
	Ahy11g2407	534	MobiDBLite	consensus disorder prediction	510	527	-	-
	Ahy11g2407	534	PANTHER	MKPA PROTEIN	84	427	-	-
	Ahy11g2407	534	CDD	DSP	232	366	-	-
	Ahy11g2407	534	PANTHER	PROTEIN-TYROSINE-PHOSPHATASE MKP1	429	523	-	-
	Ahy11g2407	534	Pfam	Dual specificity phosphatase, catalytic domain	239	369	IPR000340	GO:0008138\|GO:0016311
	Ahy11g2407	534	ProSitePatterns	Tyrosine specific protein phosphatases active site.	315	325	IPR016130	GO:0016311\|GO:0016791
	Ahy11g2407	534	SUPERFAMILY	(Phosphotyrosine protein) phosphatases II	222	372	IPR029021	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy11g2407	Ahy-Chr11	138832097	138833720	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy11g2407	84	267	Protein tyrosine phosphatase (PTP) family	AT3G55270	50.270	9.56e-42	158

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy11g2407	-		-	aip:107613560	765.763