Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g2405 ATGATATCATCCTTAAAGTACACAGCACCCTCACCCCTCGCCGGCTCTGCTGCATTCTCCTGCAGAAAGCGTGTTCCTGTTCCAAGGCTACCACCCTCTATTCAAAATCTTCAACAAAGCACTGCACTACCCTCTTTCTCTTCCCATAAACCACTTTACATTATTCCATGCACTCAGAACCTCACATTGTCAACTAAACCTAGAAGGAAGGTTGCAGAGTGTCATGCCTATGAGGCAGATAAGTCACAACCACAAGCAGCAGGGACATCAGAGGCGGCTCAGAAGCTCAAGATTGGTTTGTATTTTGCTACATGGTGGGCACTGAACGTTGTCTTCAACATATACAACAAGAAGGTTCTCAATGCTTTTCCTTACCCTTGGCTCACTTCCACTCTGTCCCTCGCCGCAGGCTCTCTTATCATGTTCATCTCCTGGGCCACAAAGCTCGCTCATGTCCCTAAAGTTAACATGGATTTCTGGAAGGCCTTGTTCCCGGTTGCAGTAGCACACACCATTGGGCATGTTGCAGCTACTGTGAGTATGTCCAAAGTTGCAGTGTCATTTACTCACATCATCAAGAGTGGAGAACCGGCTTTCAGCGTCCTAGTATCGAGGTTCTTGCTCGGCGAATCGTTCCCTATACCGGTTTACTTATCACTGGTGCCAATTATTGGAGGTTGTGCTCTTGCTGCTGTGACCGAACTCAATTTTAATATGATCGGGTTTATGGGGGCTATGATATCAAACTTGGCATTTGTGTTTAGGAACATATTCTCAAAGAAGGGAATGAAGGGCATGTCTGTTAGTGGAATGAACTATTATGCTTGCCTTTCCATATTGTCTCTATTGATTCTCACACCTTTTGCCATTCTTGTGGAGGGTCCTAAGATGTGGGCTGTTGGCTGGCAAACTGCCCTCTCTCAGATTGGTCCAAATTTTGTTTGGTGGGTAGTTGCTCAGAGTGTGTTCTACCACTTGTATAATCAAGTCTCTTACATGTCTCTTGATCAAATATCTCCCTTGACATTTAGCATAGGGAACACAATGAAGAGAATTTCAGTAATTGTCTCTTCCATTCTTATCTTCCACACGCCAATTCATCCCTCCAATGCACTTGGTGCTGCCATTGCAATTCTTGGCACCTTCTTTTATTCACAGGCAAAACAGTGA 1170 0.4496 MISSLKYTAPSPLAGSAAFSCRKRVPVPRLPPSIQNLQQSTALPSFSSHKPLYIIPCTQNLTLSTKPRRKVAECHAYEADKSQPQAAGTSEAAQKLKIGLYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLAAGSLIMFISWATKLAHVPKVNMDFWKALFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGESFPIPVYLSLVPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGMSVSGMNYYACLSILSLLILTPFAILVEGPKMWAVGWQTALSQIGPNFVWWVVAQSVFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVSSILIFHTPIHPSNALGAAIAILGTFFYSQAKQ* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g2405 389 SUPERFAMILY Multidrug resistance efflux transporter EmrE 139 232 - -
Ahy11g2405 389 PANTHER SOLUTE CARRIER FAMILY 35 38 388 - -
Ahy11g2405 389 Pfam Triose-phosphate Transporter family 96 385 IPR004853 -
Ahy11g2405 389 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Ahy11g2405 389 SUPERFAMILY Multidrug resistance efflux transporter EmrE 288 385 - -
Ahy11g2405 389 PANTHER GLUCOSE-6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 2, CHLOROPLASTIC 38 388 - -
Ahy11g2405 389 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 96 388 IPR004696 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g2405 Ahy-Chr11 138825440 138827726 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g2405 40 388 Antiporters AT5G54800 77.500 0.0 543
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g2405 K15283 K05350 gmx:100804205 598.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2405 11 138825440 138827726 Ahy1g2491 1 103326878 103328904 hybridization
Ahy11g2405 11 138825440 138827726 Ahy14g0436 14 5795757 5798185 PCT
Ahy11g2405 11 138825440 138827726 Ahy4g0356 4 4504003 4506666 PCT