Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g2396 ATGGATGGCGACGAAGCTCCTTTTCCATCTCCGTTCCCTCGCCAATCTTCATCCTCACTGCTGAACGACATCACCAACTTCAGAACCCCCAAACGCCCCTCCGTCAACCCTACCGTCGAAACTCCAAACACCAAATTCTTCACTGCCTCCAAATTAACCCCTCGCTTCTCCTCCTCCTCCGCCTCTGCTTCCCGTCGTCGCCCCTCCCTTGCTCCTCCCACGAAGAAATCAGTCGCCGCCGCAGCCAGGAAGCTCAAGGCCTTCCAAGTTGAGCAGGCACAATCTTCCAGAAAGGCCCAAGTCAAGAAGGAGCAGTCCCTTAAATCCCTAGCCAAATCCATCACCGTATGGCTCAACTTCCTCCTCCAAAACCCAGCCTCCTGCGGTTGCGACTTGTCCATCGCCGGTGTCCCCGTAGGAGATGGAACTACCACCATGCCAGCCCCCAAGGGAAAGAGGGACAGTGGCCCTGGGATCTCGGTTGGGGTCGATTCATCTTGGCGAACTCCCAAGAGGCAGAGAAAGACATGGTCCAGGAACGAGTATCGTGCTGGCAATGAGAATGCCGCACTTGAGCTCCCAAATTTGGTGTTCTCTTCTTTGAGCGATTCTCTGAAAGATGTGTGCAGCTTTGAAGATTTGAAGCAGCGAATGAGGGTTTATCTGAGCCTTGGGAGTTGTAAGGAGATTTTTGAAGTCATGAGTCTAGTCACAAAGACAATTGATGGCGGAAGGCTGAACATGAAGGCACATTGCCCTATAGTAACGGATGTTGGGTTGAAAAATAAGGCCATAGGAATCCTTATGTGTTATAATCCAATTTGGCTGCGAATTGGACTGTATATAATTTTCGGTGGTGATTCCTTGCTGTCAAGTGAAGATGTTGATTCTGATCAAGATGTCAAGTATCTGAAAATGCTCATTGACAAGCTATTCTTTTCACATGAGGGTCTAGCTAAAGCATTCTCTTATAACAAAATGGTTGAAGGCGTGTATAGGGCAGGGTACTATGAGAATTTGGGGAATGTCATTTTGAAGCGGATACTACTCCTTGTGCTTGTCTTGGATAAAGCTAAATGTCAAAGTTGCCTCCCGCTTGAGTATGGCATTGACGGATTAGATGGGGGTTCCCCTTTATTATTCAGAGCAGAGTCTTGGATTAGATCGAGTAGTCAACTGATTCATGAATTTCTATCATCTGATGTAATGCATGGAGAAGGAAACCTTTTAGCACACTTGTTGATTTTAGGTTACAAAGCATCTCATCAACAGGGTCATCTTGTTGGATATGATTTCAGTGTTAGAGATTTATTCGTTGATCTCCAAGATGGAGTGAAACTGTGTCGGGCTATTCAGCTCTTGCAACATAATCCCTCTATCCTGACGAAAATTGTAGTTCCCTCAGATACTCGTAAGAAAAATTTAGCAAACTGTGTTCTTGCCCTTCAATATCTTAAACAAGCTAGTGTGTCCCTACATGATGAAGATGGCATGATGATTTTAGCCGATGACATTGTTAGTGGTGATAAAGAACTTACACTTTCCTTGCTCTGGAATATGTTTGTTCACTTGCAGCTACCGCTTTTGGTTGACAAAACAAGTTTGGTGGGGGAAATTTCCAAAATTCGAGGAATCGGCATGGATCTCATAAACAGTGCAAATTCGACTTCTCTGGAGATGCTATTGAATTGGATTCAGGCCGTTTGTGAAAATTATGGTTGTGGAATTGACAGTTTTCATTCCCTTGTTGATGGCAAAGCTATCTGGTGCTTACTTGATTATTACTTCCAGAAGGAATTCCATAATTCCTGCTCATTGAAGGAAGTTAATATGAAAAGTAACAAGGCATCAGTAATGTCAGTTGATGAATACTCAGATGCATTGTACAATTTTATATTATCCCAGAAGTTGACTACAATACTTGGGAATTTTCCAGAGGTACTTCAGATAAGTGAGCTACTTCAATATAATGGTGCTCGCAGTGATCGAAGTGTGGTGATATTGTTGGTCTTCCTAGCAAGCCAATTATTTGTCAAGAAAAATGTGGATCAATTAAATTTCCATAAGCTCCTAGGCTATGATTGCCAAAGTGCAAACCGCAGACATTTGAGGATGGTGCAGTGCCTTTCAAGTTCTGAATCAGTACAAAATCCAGATGATTCATATGTACAAGGCAATGAAGATGCTGCAAGAAAATTCAAGGCCATCCAGGCTTGGTGGCAGGATATGGCTCAAAGAAACTCTATCAGGAAACCAGATTTTTCTAATTTGCAGAGATCCAGGACCATTGAATCTGGCACTGATACTAAAAGGGAATATGCTGCAAAAGTAATACAATCACGTTTCCGGGGATTTATCACTCGTAGTAAGTTTCACACGATGATAAATGCTGTCACCTTTTTGCAAACGGTTTTCAGAGCATGGATGAGGGCAAGGCAGGAGTTGGTCTGTGTGGCATACACCACCAGTCAAGCCTGTGACTTTTCATGTGACGTATTGAGGCATTCTCAAACGTATAGGAGATATGCCATGCTTTTTGTTCATAGGCATTCTTTAGTGAAGCTGAAGAGATCTGCAAAGCTAATACAGCAAGCTGTGAGGAGTTGGCTCTATTGCAGGCATCAGCAAGGATGCAGTAGATGTCCTTCTGTCAGGACACTAGATCCTGTGACTGCTGCCATTACTATTCAGAAATTTGTCCGTGGTTGGATGGCACGATATAGATATATTTTTGAGCTTGATCTAAAAGAGAAAGCTATGAATTTAGCCCAACAGAACATTACACTTGATCTTCATACAAATGCAGCTGTTACTATTCAGCTTGCTTGGAAGAATTACAGATGCTGCAAGTCAACCTGCCAGAAGCAGCATCTTCTTGCAACTAAAATTCAAAGTAATTTCCGTAGGTGGTTTTTAAGAAAAAGATTTTTAAATCATGTTAAAGCTACCATAAAAGTTCAATCTTATTTCCGAATGTGGAGATGTGTGAAGGCTTTACAGCACTTAAAAGTCACATCAAGAGCAGCTACTTTCATTCAGGCATTCTTGCGTGGATGGATTGCACGGAAAGAAGCTTGTGCACGCAAGAATCACATTGTTGACATTCAAAGGCATTGCCGTTGTTGGCTGATGAAACGGGACTTCTTGCTCAAAAGAGATGCTGCAGTGAAGATCCAGTGTATTATACGAAGCAGGGCATGCCAAAAGGTTCTCAATTGTCAAAAAGATGCTGCGTTGGAGATCCAGCGTTTTATCAGGGGGGATTCAGCTCGAAATCGGCTATTAGGTGGTGCTTCTACATTACGTGCTCTCATTCCTATTAGTTGCATTTCAAGACCGGTTGGAGTTTGTAGTTTTCAACTTGAACTACTGTTGTCTTCAGTTGTGAAATTGCAGCGGTGGTGGAAGCGTCTCTTGTTCCATAAATTGGCAAATAAGTCTGCCATGATTATCCAGTCCTGTGCTCGTGGGTGGATGGCCAGGAGAAAAGCCAATATTTACAGACACCAAATTGTTGTTGTCCAAGAAGATGCTGCAGTGGAGATCCAGAGATTTGTTAGGGGGCATATAACTAGAAATCGGCTGTTAGGGTGTGCTTCCAGTCTACGTGCAGCTATTCCTGTTGATTCCATTTCAAGTCCAGTTGGCTGTTGCAGTATTCAACTTAAACTGTTCTTGTTTTCTGTTGTGAAATTGCAACGATGGTGGAAAAGGTTCTTGACACAAAAAAATATGACCAACTCTGCCATTACCATTCAATCTTGCATTCGTGGATGGATAGCCAGGCAAAAGGCCGTTCTTCATAGACACCAAATTGTTGTCATCCAATCCCACTGGAAAGGTTACCTTGCACGTAGAGAGTCAAAGCAACTACTTGATTTGCGGTTGAGAATGAGAGAGTCTGCCAGAAATGTAGATGATAGCAAGCGTCTCATAAATAGACTATTGGCAGCGCTTTCAGAGCTACTTAACATGAAAAGTCTTAGTGATGTCCTGCATACTTGTTCTACATTAGATATGGCTACAGAACATTCTCAGAAATGCTGTGAAGAACTTGTGGCTGCAGGTGCAATTGACACCTTGTTGGGGCTTATCCGATCAGTCAGCAGGAGTATACCTGATCAGGAGGTTCTAAAACATGCTCTCTCAACTCTACGAAATCTTGGGCGCTACCCTCATCTACTGGAAGTGCTGATCCAAACACACAACTCTATACAAATAATTGTCATGGAGTTACTAAGGAATAAGGAGGAGGGATACTTCATTGCCTCTGAACTTATGAAGAAGATTTGTTCAACTCATTCTGGGGTTCAAGCCGTATTGAAGTCCCCAGCCCTCCTTAAACGACTGCACAACCTCGTTGATGAGCTTAAAAGAAAGGCAGTTTACGAGAAAAGAAATGGTAGAAGTGCTAGTGCAGTTATGAAAGATAACAGAGAGAGGAGATTGAAGGAAGCTGCTGAGATTCTGAAACTGATAGCACGAGCCTAA 4491 0.4297 MDGDEAPFPSPFPRQSSSSLLNDITNFRTPKRPSVNPTVETPNTKFFTASKLTPRFSSSSASASRRRPSLAPPTKKSVAAAARKLKAFQVEQAQSSRKAQVKKEQSLKSLAKSITVWLNFLLQNPASCGCDLSIAGVPVGDGTTTMPAPKGKRDSGPGISVGVDSSWRTPKRQRKTWSRNEYRAGNENAALELPNLVFSSLSDSLKDVCSFEDLKQRMRVYLSLGSCKEIFEVMSLVTKTIDGGRLNMKAHCPIVTDVGLKNKAIGILMCYNPIWLRIGLYIIFGGDSLLSSEDVDSDQDVKYLKMLIDKLFFSHEGLAKAFSYNKMVEGVYRAGYYENLGNVILKRILLLVLVLDKAKCQSCLPLEYGIDGLDGGSPLLFRAESWIRSSSQLIHEFLSSDVMHGEGNLLAHLLILGYKASHQQGHLVGYDFSVRDLFVDLQDGVKLCRAIQLLQHNPSILTKIVVPSDTRKKNLANCVLALQYLKQASVSLHDEDGMMILADDIVSGDKELTLSLLWNMFVHLQLPLLVDKTSLVGEISKIRGIGMDLINSANSTSLEMLLNWIQAVCENYGCGIDSFHSLVDGKAIWCLLDYYFQKEFHNSCSLKEVNMKSNKASVMSVDEYSDALYNFILSQKLTTILGNFPEVLQISELLQYNGARSDRSVVILLVFLASQLFVKKNVDQLNFHKLLGYDCQSANRRHLRMVQCLSSSESVQNPDDSYVQGNEDAARKFKAIQAWWQDMAQRNSIRKPDFSNLQRSRTIESGTDTKREYAAKVIQSRFRGFITRSKFHTMINAVTFLQTVFRAWMRARQELVCVAYTTSQACDFSCDVLRHSQTYRRYAMLFVHRHSLVKLKRSAKLIQQAVRSWLYCRHQQGCSRCPSVRTLDPVTAAITIQKFVRGWMARYRYIFELDLKEKAMNLAQQNITLDLHTNAAVTIQLAWKNYRCCKSTCQKQHLLATKIQSNFRRWFLRKRFLNHVKATIKVQSYFRMWRCVKALQHLKVTSRAATFIQAFLRGWIARKEACARKNHIVDIQRHCRCWLMKRDFLLKRDAAVKIQCIIRSRACQKVLNCQKDAALEIQRFIRGDSARNRLLGGASTLRALIPISCISRPVGVCSFQLELLLSSVVKLQRWWKRLLFHKLANKSAMIIQSCARGWMARRKANIYRHQIVVVQEDAAVEIQRFVRGHITRNRLLGCASSLRAAIPVDSISSPVGCCSIQLKLFLFSVVKLQRWWKRFLTQKNMTNSAITIQSCIRGWIARQKAVLHRHQIVVIQSHWKGYLARRESKQLLDLRLRMRESARNVDDSKRLINRLLAALSELLNMKSLSDVLHTCSTLDMATEHSQKCCEELVAAGAIDTLLGLIRSVSRSIPDQEVLKHALSTLRNLGRYPHLLEVLIQTHNSIQIIVMELLRNKEEGYFIASELMKKICSTHSGVQAVLKSPALLKRLHNLVDELKRKAVYEKRNGRSASAVMKDNRERRLKEAAEILKLIARA* 1497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g2396 1496 Gene3D - 890 952 - -
Ahy11g2396 1496 PANTHER ABNORMAL SPINDLE MICROTUBULE ASSEMBLY 1176 1494 - -
Ahy11g2396 1496 PANTHER ABNORMAL SPINDLE MICROTUBULE ASSEMBLY 11 1175 - -
Ahy11g2396 1496 ProSiteProfiles IQ motif profile. 771 799 IPR000048 GO:0005515
Ahy11g2396 1496 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1228 1291 IPR027417 -
Ahy11g2396 1496 Gene3D - 420 525 IPR036872 -
Ahy11g2396 1496 PANTHER UNCHARACTERIZED 1176 1494 - -
Ahy11g2396 1496 Gene3D - 1297 1465 IPR011989 -
Ahy11g2396 1496 SMART arm_5 1345 1390 IPR000225 GO:0005515
Ahy11g2396 1496 MobiDBLite consensus disorder prediction 11 67 - -
Ahy11g2396 1496 ProSiteProfiles IQ motif profile. 1268 1297 IPR000048 GO:0005515
Ahy11g2396 1496 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 929 1024 IPR027417 -
Ahy11g2396 1496 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1007 1082 IPR027417 -
Ahy11g2396 1496 SUPERFAMILY ARM repeat 1313 1457 IPR016024 -
Ahy11g2396 1496 ProSiteProfiles IQ motif profile. 956 985 IPR000048 GO:0005515
Ahy11g2396 1496 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 1356 1388 IPR000225 GO:0005515
Ahy11g2396 1496 Pfam IQ calmodulin-binding motif 981 998 IPR000048 GO:0005515
Ahy11g2396 1496 Pfam IQ calmodulin-binding motif 1272 1287 IPR000048 GO:0005515
Ahy11g2396 1496 Pfam IQ calmodulin-binding motif 1177 1195 IPR000048 GO:0005515
Ahy11g2396 1496 Pfam IQ calmodulin-binding motif 774 792 IPR000048 GO:0005515
Ahy11g2396 1496 Pfam IQ calmodulin-binding motif 892 909 IPR000048 GO:0005515
Ahy11g2396 1496 Pfam IQ calmodulin-binding motif 1247 1264 IPR000048 GO:0005515
Ahy11g2396 1496 Pfam IQ calmodulin-binding motif 1228 1244 IPR000048 GO:0005515
Ahy11g2396 1496 Pfam IQ calmodulin-binding motif 960 976 IPR000048 GO:0005515
Ahy11g2396 1496 Pfam IQ calmodulin-binding motif 1007 1024 IPR000048 GO:0005515
Ahy11g2396 1496 Pfam IQ calmodulin-binding motif 1146 1163 IPR000048 GO:0005515
Ahy11g2396 1496 ProSiteProfiles IQ motif profile. 1074 1103 IPR000048 GO:0005515
Ahy11g2396 1496 ProSiteProfiles IQ motif profile. 1175 1204 IPR000048 GO:0005515
Ahy11g2396 1496 ProSiteProfiles IQ motif profile. 1144 1171 IPR000048 GO:0005515
Ahy11g2396 1496 ProSiteProfiles Calponin homology (CH) domain profile. 413 525 IPR001715 GO:0005515
Ahy11g2396 1496 Pfam Calponin homology (CH) domain 433 523 IPR001715 GO:0005515
Ahy11g2396 1496 PANTHER UNCHARACTERIZED 11 1175 - -
Ahy11g2396 1496 MobiDBLite consensus disorder prediction 1 78 - -
Ahy11g2396 1496 SMART iq_5 1267 1289 IPR000048 GO:0005515
Ahy11g2396 1496 SMART iq_5 793 816 IPR000048 GO:0005515
Ahy11g2396 1496 SMART iq_5 1004 1026 IPR000048 GO:0005515
Ahy11g2396 1496 SMART iq_5 770 792 IPR000048 GO:0005515
Ahy11g2396 1496 SMART iq_5 978 1000 IPR000048 GO:0005515
Ahy11g2396 1496 SMART iq_5 1143 1165 IPR000048 GO:0005515
Ahy11g2396 1496 SMART iq_5 955 977 IPR000048 GO:0005515
Ahy11g2396 1496 SMART iq_5 854 876 IPR000048 GO:0005515
Ahy11g2396 1496 SMART iq_5 1027 1049 IPR000048 GO:0005515
Ahy11g2396 1496 SMART iq_5 888 910 IPR000048 GO:0005515
Ahy11g2396 1496 SMART iq_5 1174 1196 IPR000048 GO:0005515
Ahy11g2396 1496 SMART iq_5 1073 1095 IPR000048 GO:0005515
Ahy11g2396 1496 SMART iq_5 1244 1266 IPR000048 GO:0005515
Ahy11g2396 1496 Gene3D - 1244 1295 - -
Ahy11g2396 1496 Gene3D - 953 1005 - -
Ahy11g2396 1496 Gene3D - 769 819 - -
Ahy11g2396 1496 Gene3D - 1006 1051 - -
Ahy11g2396 1496 Gene3D - 1142 1205 - -
Ahy11g2396 1496 Gene3D - 1052 1102 - -
Ahy11g2396 1496 ProSiteProfiles IQ motif profile. 1005 1034 IPR000048 GO:0005515
Ahy11g2396 1496 ProSiteProfiles IQ motif profile. 1245 1272 IPR000048 GO:0005515
Ahy11g2396 1496 ProSiteProfiles IQ motif profile. 891 918 IPR000048 GO:0005515
Ahy11g2396 1496 SUPERFAMILY Calponin-homology domain, CH-domain 346 608 IPR036872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g2396 Ahy-Chr11 138665846 138674349 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g2396 935 1094 Myosins gene family AT1G04160 29.878 1.13e-06 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g2396 K16743 - gmx:100817636 1588.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2396 11 138665846 138674349 Ahy1g2500 1 103416216 103424577 hybridization