Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g2348 ATGTGGCTTATCTGGGGTTGTAGTGGCCCGTTTCACTCACCAAATATTACTTGGACTTATCTTCACTTCCAAGGAATAATGCACGGCGATGTGAAGCGGCAGAATGACTTGGTGATAGCACAAGGAGCCAAGATAACTGATTTTGATTACGCTCTTAAGGTGGTGGCTGATGGTGAGAGTGTGATTCAGGACGCCGGCGTACAAGACACATGGAGAGAAGTAGAATTTTCTGTTGATGTGTGGACACTTAGGTGTGTAGTGTTAGAAATGATAACAGAAGAGCCACTCTGGCACTATCTACATGATAATGACCCTATTAAGGTACTTTATCGGATTGGTTTCTTGGATGAGGTGCCAGAAATTCCAAGCCATGTCTCAGACGAAGGAAAGGATTTTTTGGCGAAATGTTTTAAGAGAGACCCTAGTGAGAGGGGGTTGGTTGAGGAACTTCTTAGGCATGGATTTATTCATACCTTTAATGAGCATATTGATTATGAACTCGAGTTGGGTAGCTTTGAGCATTTATATACTTCCATGGATATGTTGGAAATAGAGCATGACTATACATAG 570 0.4211 MWLIWGCSGPFHSPNITWTYLHFQGIMHGDVKRQNDLVIAQGAKITDFDYALKVVADGESVIQDAGVQDTWREVEFSVDVWTLRCVVLEMITEEPLWHYLHDNDPIKVLYRIGFLDEVPEIPSHVSDEGKDFLAKCFKRDPSERGLVEELLRHGFIHTFNEHIDYELELGSFEHLYTSMDMLEIEHDYT* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g2348 189 SUPERFAMILY Protein kinase-like (PK-like) 20 178 IPR011009 -
Ahy11g2348 189 ProSiteProfiles Protein kinase domain profile. 1 156 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy11g2348 189 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 19 159 - -
Ahy11g2348 189 PANTHER MAP KINASE KINASE KINASE 19 159 - -
Ahy11g2348 189 Gene3D Transferase(Phosphotransferase) domain 1 17 173 - -
Ahy11g2348 189 Pfam Protein kinase domain 19 156 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g2348 Ahy-Chr11 137702852 137703421 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g2348 20 156 MAP Kinase Kinase Kinase AT5G55090 42.361 6.76e-27 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Ahy11g2348 Pkinase 2.00E-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g2348 K20716 - ahf:112721951 403.675