Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g2346 ATGGACACAGCAGGATGGGCTCTCACTCTTGATTCCTCTTCTTCATTTTCCTCTTCTAAGAGTTCTGCCATCCGCCACAGCAACAAAAGCCACGTCAGCATCATGTTCCCAACCTTGGGAGGGTTTTCTGCCACCGATCCATCCATGTCGTCAGATCATAACAATCGAGCGGTTGTGGGCGAAGTGGACTTCTTCAACACGTCATCATCCTCATCCGTTAAGAACCAGACTTGCACTCATGGAAGCCTTTCCGAGTTTAATCTCCACGTAAATACTGGTCTGCAACTCCTTACTGCCAACAGTAAAAGCGATCAATCTACGGTGGATGATGGGGTTTCATCAGACGCTGAAGATAAGCGCCCAAAAACCACCCAGCTGGTACAAGTGCAAGAAGAACTCCAACGTGTGAATTCAGAGAACCAAAAGCTAAAGGAGACGCTCAACCATATGAGAAGTAGCTACATGAATTTGCAAATGCAAGTTGCCGCATTAATGCAACACCAACAGAAACAGCAAGTTTCCGAGACCACCACAGAAAATCATGAGGTAGGGAAAGTAAAAGGTGATGATGAGAAAAAGGAAGGGGGTAGTAGTGGAGGTGGAGGAATGATACCAAGACAGTTGCTTGATTTAGTTGCAAGTGGCACAGCCGAAGTAGACGATCAAGTATCTAATTCTTCTTCAGAAGAAAGAACTCGATCCAGCACACCTCAAAACCATAAAAACAGCAATGGCAAAATGGAGAATACTGGAGAGGATTTAGAATCATCACAACAAGGTTGGGAAAATCCCAACAAGTTTCAGAGACTGAACCCTGCCACAGATCAATCCACTGCAGAAGCCACCATGCGAAAAGCTCGTGTCTCTGTCCGCGCCCGATCAGAAGCCCCTATGATCAGCGACGGGTGCCAATGGCGAAAATATGGACAAAAGATGGCTAAGGGAAACCCTTGTCCTCGAGCATATTACAGATGCACCATGGCAGTTGGTTGCCCAGTTCGTAAACAAGTTCAACGTTGTGCGGAGGATAGAACAATATTGATAACGACATACGAAGGGACGCACAACCACCCACTGCCGCCTGCTGCGATGGCGATGGCGTCCACAACGGCGGCGGCGGCTAGCATGCTTCTCTCTGGATCAATGTCAAGCGCTGACGGAATAATGAACTCGAGCATGATGGCAAGAGCGATTCTTCCGTCTTCAAGCATGGCAACGCTATCAGCATCAGCACCATTCCCAACCGTCACACTCGACCTCACGCACCAACCGAACGCGTTGCCTTTGCAGTATCACCAACGGCAGCAACAACAACAACAACAACATCCTCACGCGCAATTGCCGCAAGTGATTGCACAAGCGCTCTATAACCAATCCAAATTCTCTGGCCTTCAATTGTCTCAAGATGTTGGTTCCTCCCAAGCTTCAAGGCTACCGTCGTTGCACCCTAACCAAAATAATCCCTTGCTCGCCGACAAGGTCAACGCCATCACCAACGATCCTAACTTCACGGCGGTCGTCGCAGCCGCCATTTCCTCCATCATCGGTGGGGCTCATCAAAATAACAACGCCAACAACTCCGACGCAAATCCCAATATCATCAACAGTGCTACAGTCGGCAGCTTTTCAGGAAATTAG 1638 0.4853 MDTAGWALTLDSSSSFSSSKSSAIRHSNKSHVSIMFPTLGGFSATDPSMSSDHNNRAVVGEVDFFNTSSSSSVKNQTCTHGSLSEFNLHVNTGLQLLTANSKSDQSTVDDGVSSDAEDKRPKTTQLVQVQEELQRVNSENQKLKETLNHMRSSYMNLQMQVAALMQHQQKQQVSETTTENHEVGKVKGDDEKKEGGSSGGGGMIPRQLLDLVASGTAEVDDQVSNSSSEERTRSSTPQNHKNSNGKMENTGEDLESSQQGWENPNKFQRLNPATDQSTAEATMRKARVSVRARSEAPMISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDRTILITTYEGTHNHPLPPAAMAMASTTAAAASMLLSGSMSSADGIMNSSMMARAILPSSSMATLSASAPFPTVTLDLTHQPNALPLQYHQRQQQQQQQHPHAQLPQVIAQALYNQSKFSGLQLSQDVGSSQASRLPSLHPNQNNPLLADKVNAITNDPNFTAVVAAAISSIIGGAHQNNNANNSDANPNIINSATVGSFSGN* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g2346 545 MobiDBLite consensus disorder prediction 165 179 - -
Ahy11g2346 545 Gene3D WRKY domain 284 361 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy11g2346 545 MobiDBLite consensus disorder prediction 180 196 - -
Ahy11g2346 545 PANTHER WRKY TRANSCRIPTION FACTOR 6 33 527 - -
Ahy11g2346 545 SMART WRKY_cls 299 359 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy11g2346 545 MobiDBLite consensus disorder prediction 218 283 - -
Ahy11g2346 545 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 33 527 IPR044810 GO:0003700
Ahy11g2346 545 Coils Coil 126 160 - -
Ahy11g2346 545 MobiDBLite consensus disorder prediction 165 205 - -
Ahy11g2346 545 MobiDBLite consensus disorder prediction 101 124 - -
Ahy11g2346 545 MobiDBLite consensus disorder prediction 217 293 - -
Ahy11g2346 545 Pfam WRKY DNA -binding domain 301 358 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy11g2346 545 ProSiteProfiles WRKY domain profile. 294 360 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy11g2346 545 SUPERFAMILY WRKY DNA-binding domain 292 360 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g2346 Ahy-Chr11 137681653 137685557 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g2346 54 526 WRKY Transcription Factor Family AT1G62300 53.346 1.03e-138 411
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Ahy11g2346 WRKY 5.60E-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g2346 - - ccaj:109803638 531.561