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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Ahy11g2319
ATGGAGGAGGAGGGTAATGGCACTTATAGTATGATGGCTTTTGGCGAGAACATCATGAGTACTAGTAATAATAGTGGGATTTATCCAATCATCATGATGCCTTTACTCACTACCCCAGTTATTAATCCTCTTCCTAATCTTAATTACTCTAATCCTAATAATACTAGTAATGATAATGCAGACACAAATAGTTCCTTCCCTCTTCCCATGCTTACTACTCATCAAGAACCAATCCGCAACAACACTGGGATATGTTACTTCATGGACATACACAACAACCACCATGGAAGCTCTTCTTCTTCCTCTTCAGCTCTCAAGGCCAAGATCATGTCTCATCCTCACTATCATCGCCTCTTGGCTGCATACGTCAATTGTCAAAAGGTTGGAGCACCGCCTGAAGTGGTGGCAAGGTTAGAAGAAGCATGTGAATCTGCAGCGGCAATGGCAGCAACTTCTTGCATAGGTGAAGATCCAGCTCTGGATCAGTTCATGGAGGCCTACTGTGAGATGCTTATCAAGTACGAGCAAGAACTCTCCAAACCCTTCAAGGAATCCATGCTTTTCCTTCAGCGCATGGAGTCCCAGTTCAAATCCCTCTCCATTTCTCCTTCCAATAACTTCGCCGGTAATGAAGGTGTTGATAGGAATGGATCATCCGAGGATGATGTTGATTTACAAAACAATGCAATAATTGATCCGCAAGCAGAGGACCGGGAGCTGAAGGGTCAGCTATTGCGCAAGTACAGCGGATACCTTGGTAGTCTGAAGCAGGAATTCATGAAGAAGAGGAAAAAAGGGAAGCTCCCTAAAGAAGCAAGGCAACAGCTACTTGAATGGTGGAGCAGACATCACAAATGGCCTTACCCATCTGAATCACAGAAGGTGGCGCTTGCAGAGTCAACAGGTTTGGACCAGAAACAGATAAACAACTGGTTTATTAATCAAAGGAAACGGCATTGGAAGCCTTCAGAGGATATGCAGTTTGTGGTGATGGATCAAAGCCATCCACATTATTACATTGACAATGTTGTGGCCAATCCCTTTCCCATGGATTTTTCTCACACAATGCTTTGA
1074
0.4395
MEEEGNGTYSMMAFGENIMSTSNNSGIYPIIMMPLLTTPVINPLPNLNYSNPNNTSNDNADTNSSFPLPMLTTHQEPIRNNTGICYFMDIHNNHHGSSSSSSSALKAKIMSHPHYHRLLAAYVNCQKVGAPPEVVARLEEACESAAAMAATSCIGEDPALDQFMEAYCEMLIKYEQELSKPFKESMLFLQRMESQFKSLSISPSNNFAGNEGVDRNGSSEDDVDLQNNAIIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLEWWSRHHKWPYPSESQKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDQSHPHYYIDNVVANPFPMDFSHTML*
358
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Ahy11g2319
357
Pfam
Homeobox KN domain
279
318
IPR008422
GO:0003677|GO:0006355
Ahy11g2319
357
ProSiteProfiles
'Homeobox' domain profile.
259
322
IPR001356
GO:0003677
Ahy11g2319
357
SMART
ELK_2
239
260
IPR005539
GO:0003677
Ahy11g2319
357
SMART
KNOX1_2
103
147
IPR005540
GO:0003677|GO:0005634
Ahy11g2319
357
CDD
homeodomain
271
323
IPR001356
GO:0003677
Ahy11g2319
357
PANTHER
HOMEOBOX PROTEIN TRANSCRIPTION FACTORS
6
346
-
-
Ahy11g2319
357
SMART
HOX_1
261
326
IPR001356
GO:0003677
Ahy11g2319
357
Pfam
ELK domain
239
260
IPR005539
GO:0003677
Ahy11g2319
357
SUPERFAMILY
Homeodomain-like
261
336
IPR009057
-
Ahy11g2319
357
Pfam
KNOX2 domain
153
199
IPR005541
GO:0003677|GO:0005634
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Ahy11g2319
Ahy-Chr11
137189255
137192646
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Ahy11g2319
105
357
Homeobox Transcription Factor Family
AT1G62360
80.228
3.99e-134
386
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
HB-KNOX
Ahy11g2319
KNOX2
2.70E-20
No_clan
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Ahy11g2319
-
-
gmx:547796
479.174
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Ahy11g2319
11
137189255
137192646
Ahy1g2538
1
103886561
103890850
hybridization
Ahy11g2319
11
137189255
137192646
Ahy14g0500
14
6665561
6670574
PCT
Ahy11g2319
11
137189255
137192646
Ahy4g0418
4
5315259
5319977
PCT
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