Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g2311 ATGCATGTAGGGTCAGTCTTGGTCAACTCACAGGATCAGTCCAAACCCAAACTCTTACCCACACACATTGAAAGCAAGAAGGGTCAACTTGTATTGTTTGTTGAACAGCTCAGCAGTTCCAAGTCCGAAGCGCCAGATCAAAAACTGGCACAAGTGAAAAGCGTTGAGACTCGTGCTCTTTCACTGTTGAACAATTTGGCGCCAAAAATCATGAAGCTCGACAACTCCAACAACTCCAACGGCCAGAGTTTCGCCGGCGCCGACGACGACGTATTCGTGCCGCCGCTCAACTTCGCCATGGTCGATCAAGGCATTTTTAGGTCTGGTTTTCCCGACTCTGCCAACTTCAGCTTCTTAAAATCCCTTCGTCTCCGCACTGTTATATGTTTGTGCCCTGAACCGTATCCAGAAGTGACTTCTGAATTTCTCAAGGCCAACGGAATAAAGCTTTATCAATTCGGGATCGATGGATGTAAGGAACCCTTTGTCAACATCCCAGATGACACAGTTCGTGAAGCTTTGAAAGTAGTCCTCGATGTCAGGAACCACCCAGTACTAATTCATTGTAAACGAGGGAAGCATCGCACTGGTTGCCTTGTGGGATGCATCAGAAGATTGCAGAAATGGTGCCTATCTTCTGTATTTGATGAGTACCAAAGGTTTGCAGGCGCCAAGGCCAGAGTTTCGGATCAGAGGTTCATCGAATTGTTTGATATTTCTTGTCTCAAGTCAAACCCGCTCTCATTTTCTTGCTCCGGGAAATAG 765 0.468 MHVGSVLVNSQDQSKPKLLPTHIESKKGQLVLFVEQLSSSKSEAPDQKLAQVKSVETRALSLLNNLAPKIMKLDNSNNSNGQSFAGADDDVFVPPLNFAMVDQGIFRSGFPDSANFSFLKSLRLRTVICLCPEPYPEVTSEFLKANGIKLYQFGIDGCKEPFVNIPDDTVREALKVVLDVRNHPVLIHCKRGKHRTGCLVGCIRRLQKWCLSSVFDEYQRFAGAKARVSDQRFIELFDISCLKSNPLSFSCSGK* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g2311 254 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 92 239 IPR029021 -
Ahy11g2311 254 PANTHER TYROSINE-PROTEIN PHOSPHATASE 80 252 - -
Ahy11g2311 254 PANTHER TYROSINE-PROTEIN PHOSPHATASE DSP1 80 252 - -
Ahy11g2311 254 Gene3D Protein tyrosine phosphatase superfamily 91 241 IPR029021 -
Ahy11g2311 254 ProSitePatterns Tyrosine specific protein phosphatases active site. 187 197 IPR016130 GO:0016311|GO:0016791
Ahy11g2311 254 CDD PFA-DSP_Siw14 92 238 - -
Ahy11g2311 254 Pfam Tyrosine phosphatase family 93 245 IPR004861 -
Ahy11g2311 254 PRINTS Plant and fungal dual specificity phosphatase signature 129 142 IPR020428 GO:0016791
Ahy11g2311 254 PRINTS Plant and fungal dual specificity phosphatase signature 92 109 IPR020428 GO:0016791
Ahy11g2311 254 PRINTS Plant and fungal dual specificity phosphatase signature 148 162 IPR020428 GO:0016791
Ahy11g2311 254 PRINTS Plant and fungal dual specificity phosphatase signature 165 179 IPR020428 GO:0016791
Ahy11g2311 254 ProSiteProfiles Dual specificity protein phosphatase domain profile. 97 251 IPR020422 GO:0006470|GO:0008138
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g2311 Ahy-Chr11 136981926 136985448 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g2311 63 254 Protein tyrosine phosphatase (PTP) family AT4G03960 66.667 7.57e-97 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g2311 K18045 - gmx:100785520 324.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2311 11 136981926 136985448 Ahy1g2545 1 104022070 104025397 hybridization