Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g2310 ATGAAATTAGCCACTTTTGTCATAAACCAAGCCATTGGTGAAGAGGAGATAGATCCCGAGGAGGGAATGTGCTTCGGCACATTAGAAGATGCGCGTGCATATTATTACCGATATGCGGCTAGGACTGGATTTGTCGTCAAAATAAGAACCACCGGCTGGGAGACGAGAAACGATCAGAGGGTGGTTGTTAATCAGGCTTTGCATTGTAACAGAGATGGATACCGCACATTCCTTGTAAAGGCACCCAAGAGAAGGAAAACGGTAGCCTCAACCAACTGCAAAGCCCGTTGTTATTTGGCATTAGATAAAATGACAGGGCAGTGGAGGATTTCTCGAGTAGAGTTATCCCACTCACACCCGCTTAATCCGAAACTATCTGTAATGTTCTCAACAAACCGTCAGCTAAGTATGCATGTGAAGGACCTGATACAGCAAAATGACCAAGCTTGCATTAGATCGAGTAAGACGTACCAGGCACTAGCCAATACCGTCGGTGGCCCTGCCAACCTCACCTTTACAGAGAAGGATGTTAGAAATTACATTAGTCGTCACTTACGCATTTCCGGGGATGAGACAGATCCAAAAGAGTTATTTAAGCACTTCTCACGGATGAAGGAGCTCAATCCGAACTTTTTCTTTGAAATAGATGTGGACGAAAACCATAGCATTAGAAATATGTTTTGGGCCGATGCTCGGTGTAGAGCTGCATGGAAATATTTTGGTGATGTTGTGACGTTTGACACTACTTACAAGACTAATAGGTACGACATGCCATTTGGATCTTTTGTAGGTGTCAACCACCATGGGATGTCTATGCTTTTTGGGTGCGCATTATTGCGGAATGAGGACACTCGTACATTCGAATGGCTTTTTCGTACTTGGTTGAAGTGCATGGGTAAGGCCCCTATATGTGTTATAACAGATCAGTCGCTGCAGATGCGTTCTGCATTAGAGACCACATTACCACACACACGCCATGGATGGTGCATATGGCATATCCTAAACAAGATACCAAATAAGCTGGTAGGTTACCGTCATTTCGATCAGCTTATCACATGCATGAAGAGGATTGTATTTGAATCCAAATCTAAGGACTCATTTGAGAGAGATTGGCACGATTTCATTGAAGAGTATGACCTCCACAATTCTAGGTGGCTAAATGATATGTTTGCTGACCGACACATGTGGGTGTCAGTATTTTTCAAGGACGAATTCTGGGCTGGCATGAGGAGCACACAGCGTAGTGAAAGCATGCATTCTGTTTTCGATAAGTACTTAAACAGTAAGAGCTCTTTGTTGCAATTTGTTCGCCAATACCAAAACTGTGTTATAGACAAGGAGCAAAAGGAGCTTGAGTGCGACGCTGCTGATTTAAGGGGTATTATCCCTTGTGTTTCTAGCTCACCAATAGAGAAGCAGTTCCAGAGAGAATATACAAACTCCATGTTTCAAGACGTTCAGGATCAATTTATAAAAAAGGCCGATTGTGACATCTCCTCAGTCAACCATCATGGCACAAGTATAGTTTGTGAAGTTGACCAACAAAAGATGGTGTTTGACATGTCAGTGTATAGCAGATACCAAGTCATGTATTGCTCACAGTCATCAGACGTTCAATGTGATTGCTTTATGTTCCAATCGAATGGTATTCTATGCTGCCACAGTCTTGCTGTTCTCCTACATTTTCATGTGACAACAGTGTCCTCACAATACATTCTATCCCGATGGAGTAAGAATGTTAGTCGGAGACACACATACATCAGGAGTAGCATTGACATGGACCGTTCTGATGAAAGCATGACCATTTTTAGGGAATTGTGTTCTGATTTTTACAACGTTGCTCAAGATTTCGTGGTTACTCCGGAGGTTGCTGCTATATTGCGTGATGCCATGGATAGTGCTCGGTAG 1908 0.4303 MKLATFVINQAIGEEEIDPEEGMCFGTLEDARAYYYRYAARTGFVVKIRTTGWETRNDQRVVVNQALHCNRDGYRTFLVKAPKRRKTVASTNCKARCYLALDKMTGQWRISRVELSHSHPLNPKLSVMFSTNRQLSMHVKDLIQQNDQACIRSSKTYQALANTVGGPANLTFTEKDVRNYISRHLRISGDETDPKELFKHFSRMKELNPNFFFEIDVDENHSIRNMFWADARCRAAWKYFGDVVTFDTTYKTNRYDMPFGSFVGVNHHGMSMLFGCALLRNEDTRTFEWLFRTWLKCMGKAPICVITDQSLQMRSALETTLPHTRHGWCIWHILNKIPNKLVGYRHFDQLITCMKRIVFESKSKDSFERDWHDFIEEYDLHNSRWLNDMFADRHMWVSVFFKDEFWAGMRSTQRSESMHSVFDKYLNSKSSLLQFVRQYQNCVIDKEQKELECDAADLRGIIPCVSSSPIEKQFQREYTNSMFQDVQDQFIKKADCDISSVNHHGTSIVCEVDQQKMVFDMSVYSRYQVMYCSQSSDVQCDCFMFQSNGILCCHSLAVLLHFHVTTVSSQYILSRWSKNVSRRHTYIRSSIDMDRSDESMTIFRELCSDFYNVAQDFVVTPEVAAILRDAMDSAR* 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g2310 635 Pfam MULE transposase domain 243 335 IPR018289 -
Ahy11g2310 635 Pfam FAR1 DNA-binding domain 34 123 IPR004330 -
Ahy11g2310 635 SMART 26again6 538 565 IPR006564 GO:0008270
Ahy11g2310 635 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 15 601 IPR031052 GO:0006355
Ahy11g2310 635 ProSiteProfiles Zinc finger SWIM-type profile. 527 563 IPR007527 GO:0008270
Ahy11g2310 635 PANTHER OS03G0843700 PROTEIN 15 601 - -
Ahy11g2310 635 Pfam SWIM zinc finger 534 561 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g2310 Ahy-Chr11 136949917 136952128 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy11g2310 MULE 2.60E-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g2310 - - ahf:112805526 1157.13