Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g2271 ATGGGAATTGATGAGGCACAAGAGTCATTGCTTGCAAGAGATCATTATCATGAGAAAAGTGACCTCCAGAGAAGAAGGTCCACCAGGAATTATGGCACAGCTTCATCTGATTCATCGTCACAGACAATCAACAATCTCCAACAAAATAATAGTAATCATGTAGTTATAGTCCAAAATAATAATAATAATAATAATAATAATCCTTCAACAGCACAAGCAGAATTTCAATTGAAACCAGTGTTGTTGTGGCTAACAATGTACCTAGGTGGAGGTACCCTATGCTTCTATATGATAAGTAACCAAATTGAAGGTACAAAAACCAATCCCTTTCTTGATGCACTTTACTTGTGTGTTGTGACAATGACCACCGTGGGTTATGGAGATCTTGTCCCTAAAAGCACAGTGGCAAAACTACTTGCATGCTTCTATGTCTTCACCGGAATGGCCCTCGTTGGTTTGATTCTTAACAAAGCAGCAGATTACATTGTTGAGAAGCAAGAAATGTTGTTTGTTAAGGCCATGCACAAAGAGATTGACAAAGAGTTTCAATCTAACAACAATAGCAACAAGGCCAAACACAAGTTCTTGGTTGCAATTTGCACCTTCTTGGTGCTTATTACAGTGGGAGTGATTTTCCTATCTTGTGTTGAGGATCTTGATTTTGTGGATGCATTGTATTGTGTTTGTTCCACAGTGACAACTTTGGGTTATGGGGATAAGAGTTTTTCAACTGGAATTGGTCGTGCTTTTGCAGTGTTTTGGATATTGAGTAGCACCATTTGCTTAGCTCAATGTTTTGCATATCTTGCTGAAATGCACACTGATGAAAGACAAAGATCACTTGCCAAAATGATTCTTTCTAGGAAAATCTCACGTCCTGATCTTGAAGCTGCTGATCTTGATGGAGACAAATCTGTTAGTGCTGCAGAGTTTGTTGTATACAAGTTGAAGGAAATGGGAAAGATCAACGATGAAGATGTTTCCGATGTATTGGAATGGTTTAGAAAACTAGATGTAGATAAATCAGGAACTCTGACAGAAGCTGATATCATTTGA 1056 0.3816 MGIDEAQESLLARDHYHEKSDLQRRRSTRNYGTASSDSSSQTINNLQQNNSNHVVIVQNNNNNNNNNPSTAQAEFQLKPVLLWLTMYLGGGTLCFYMISNQIEGTKTNPFLDALYLCVVTMTTVGYGDLVPKSTVAKLLACFYVFTGMALVGLILNKAADYIVEKQEMLFVKAMHKEIDKEFQSNNNSNKAKHKFLVAICTFLVLITVGVIFLSCVEDLDFVDALYCVCSTVTTLGYGDKSFSTGIGRAFAVFWILSSTICLAQCFAYLAEMHTDERQRSLAKMILSRKISRPDLEAADLDGDKSVSAAEFVVYKLKEMGKINDEDVSDVLEWFRKLDVDKSGTLTEADII* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g2271 351 ProSiteProfiles EF-hand calcium-binding domain profile. 325 351 IPR002048 GO:0005509
Ahy11g2271 351 Gene3D - 294 351 - -
Ahy11g2271 351 PRINTS Two pore domain K+ channel signature 119 147 IPR003280 GO:0005267|GO:0016020|GO:0071805
Ahy11g2271 351 PRINTS Two pore domain K+ channel signature 233 242 IPR003280 GO:0005267|GO:0016020|GO:0071805
Ahy11g2271 351 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 39 349 IPR003280 GO:0005267|GO:0016020|GO:0071805
Ahy11g2271 351 Pfam Ion channel 83 163 IPR013099 -
Ahy11g2271 351 Pfam Ion channel 202 272 IPR013099 -
Ahy11g2271 351 Gene3D - 172 292 - -
Ahy11g2271 351 SUPERFAMILY Voltage-gated potassium channels 188 288 - -
Ahy11g2271 351 Gene3D - 75 171 - -
Ahy11g2271 351 MobiDBLite consensus disorder prediction 15 44 - -
Ahy11g2271 351 ProSitePatterns EF-hand calcium-binding domain. 338 350 IPR018247 -
Ahy11g2271 351 SUPERFAMILY Voltage-gated potassium channels 78 169 - -
Ahy11g2271 351 PANTHER OUTWARD RECTIFYING POTASSIUM CHANNEL PROTEIN 39 349 - -
Ahy11g2271 351 SUPERFAMILY EF-hand 295 350 IPR011992 -
Ahy11g2271 351 MobiDBLite consensus disorder prediction 27 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g2271 Ahy-Chr11 136289223 136290823 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g2271 77 351 Ion Channels AT5G55630 55.674 1.91e-109 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g2271 K05389 - gmx:100799492 414.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2271 11 136289223 136290823 Ahy1g2585 1 104486508 104488106 hybridization