Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g2263 ATGGGGAATGTGAATGTCAATAATCATAATAATAACGGTGCTACTCATTCAGAAGAAGACGACGAAGACGATGAAGCTTCTTCTTCGGGTACTCTTCCCACACCTCCCACCGAATTGATAGGTCAATCTCCACCTACAAGCCCCAGAGCTACCCATTCTCCCTTCATCTTCGCTCCTCAAGCTCCGGTGGTTCCACTACAGAGACCAGATGAGATGCATATTCCAAGTCAATCCTGGTTGCAATCTACCTCAGGGTATGAAGACATGTACAGTGAACTCGGAATTCCAACAATGATTACCTGGAGTTATGGTGGGAAAGAAGTAGCTGTGGAAGGGTCTTGGGATAGTTGGAAAACAAGAATACCATTGCAGAGGTCAGGGAAAGACTTCACAATAATGAAGGTACTGCCTTCTGGTGTTTACCAATATAGATTTATTGTGGATGGACGGTGGAGGTACACTCCGGACTCGCCATGGACACAAGATGATGCAGGGAATGCTTACAATATCTTAGACTTGCAGGATTATGTTCCTGAGGACATTGAAAGCATCTCTAGTTTTGAACCTCCTCAATCACCAGACTCAAGTTATAGCAGTTTACATCTTAGTTCTGATGATTATGCAAAGGAACCACCATTGGTTCCCCCACACTTGCAAATGACATTGCTAAATGTTCCAGTGACAAATATGGAAACGCAACCTCCTATGTCAAGACCTCAACATGGAGTGCTCAATCATCTTTACATGCAGAAAAGAAAGAGCACTCCTTCAGTGGTTGCGCTTGGCACAACGCATCGGTTTCTTGCCAAGTACGTCACTGTGGTGCTGTACAAGTCTCTGCAGAGGTAA 849 0.4464 MGNVNVNNHNNNGATHSEEDDEDDEASSSGTLPTPPTELIGQSPPTSPRATHSPFIFAPQAPVVPLQRPDEMHIPSQSWLQSTSGYEDMYSELGIPTMITWSYGGKEVAVEGSWDSWKTRIPLQRSGKDFTIMKVLPSGVYQYRFIVDGRWRYTPDSPWTQDDAGNAYNILDLQDYVPEDIESISSFEPPQSPDSSYSSLHLSSDDYAKEPPLVPPHLQMTLLNVPVTNMETQPPMSRPQHGVLNHLYMQKRKSTPSVVALGTTHRFLAKYVTVVLYKSLQR* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g2263 282 Gene3D - 183 280 - -
Ahy11g2263 282 Pfam Glycogen recognition site of AMP-activated protein kinase 95 174 IPR032640 -
Ahy11g2263 282 MobiDBLite consensus disorder prediction 28 50 - -
Ahy11g2263 282 PANTHER SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-1 1 282 IPR043554 -
Ahy11g2263 282 SUPERFAMILY E set domains 95 180 IPR014756 -
Ahy11g2263 282 CDD E_set_AMPKbeta_like_N 96 172 - -
Ahy11g2263 282 Gene3D Immunoglobulins 90 177 IPR013783 -
Ahy11g2263 282 MobiDBLite consensus disorder prediction 1 54 - -
Ahy11g2263 282 SUPERFAMILY AMPKBI-like 177 279 IPR037256 -
Ahy11g2263 282 Pfam 5'-AMP-activated protein kinase beta subunit, interaction domain 208 278 IPR006828 GO:0005515
Ahy11g2263 282 SMART AMPKBI_2 190 280 IPR006828 GO:0005515
Ahy11g2263 282 PANTHER SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-2 1 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g2263 Ahy-Chr11 136063252 136066168 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g2263 105 175 Protein tyrosine phosphatase (PTP) family AT3G01510 35.616 3.37e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g2263 K07199 - gmx:100777497 422.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2263 11 136063252 136066168 Ahy1g2594 1 104615753 104618661 hybridization
Ahy11g2263 11 136063252 136066168 Ahy14g0582 14 8042884 8046222 PCT
Ahy11g2263 11 136063252 136066168 Ahy4g0509 4 6584947 6588273 PCT